Update integron finder tool version

[fmalmeida]

During #118 it was detected an issue in the INTEGRON FINDER tool.
We opened an issue in the tool's repo, gem-pasteur/Integron_Finder#114
Once the fix is available on a new release, the pipeline should then update the contained version of the tool in the Docker image.
As a workaround, while not available, we added parameters to skip this modules.