diff --git a/CONTRIBUTING.html b/CONTRIBUTING.html index 36dbc53..0cbc6d6 100644 --- a/CONTRIBUTING.html +++ b/CONTRIBUTING.html @@ -33,7 +33,7 @@

Contributing to SWMPr

- Source: .github/CONTRIBUTING.md + Source: .github/CONTRIBUTING.md
diff --git a/ISSUE_TEMPLATE.html b/ISSUE_TEMPLATE.html index a250268..ee82651 100644 --- a/ISSUE_TEMPLATE.html +++ b/ISSUE_TEMPLATE.html @@ -33,7 +33,7 @@

Issues reporting guide

- Source: .github/ISSUE_TEMPLATE.md + Source: .github/ISSUE_TEMPLATE.md
diff --git a/articles/Overview.html b/articles/Overview.html index 9d3126f..a41f7cf 100644 --- a/articles/Overview.html +++ b/articles/Overview.html @@ -59,7 +59,7 @@

Overview

- Source: vignettes/Overview.Rmd + Source: vignettes/Overview.Rmd
Overview.Rmd
diff --git a/authors.html b/authors.html index d2aaad6..7ff7794 100644 --- a/authors.html +++ b/authors.html @@ -50,7 +50,7 @@

Authors

Citation

-

Source: inst/CITATION

+

Source: inst/CITATION

Beck MW (2016). “SWMPr: An R Package for Retrieving, Organizing, and Analyzing Environmental Data for Estuaries.” diff --git a/news/index.html b/news/index.html index 421d636..ca38435 100644 --- a/news/index.html +++ b/news/index.html @@ -33,7 +33,7 @@

Changelog

- Source: NEWS.md + Source: NEWS.md
diff --git a/pkgdown.yml b/pkgdown.yml index ab97e14..99cbfbb 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -3,7 +3,7 @@ pkgdown: 2.1.1 pkgdown_sha: ~ articles: Overview: Overview.html -last_built: 2025-02-02T22:47Z +last_built: 2025-02-03T17:44Z urls: reference: http://fawda123.github.io/SWMPr/reference article: http://fawda123.github.io/SWMPr/articles diff --git a/reference/aggremetab.html b/reference/aggremetab.html index 8bfe02e..1589cdc 100644 --- a/reference/aggremetab.html +++ b/reference/aggremetab.html @@ -33,7 +33,7 @@

Aggregate metabolism data

- Source: R/aggremetab.R + Source: R/aggremetab.R
aggremetab.Rd
diff --git a/reference/aggreswmp.html b/reference/aggreswmp.html index f2934ba..2c86079 100644 --- a/reference/aggreswmp.html +++ b/reference/aggreswmp.html @@ -33,7 +33,7 @@

Aggregate swmpr data

- Source: R/aggreswmp.R + Source: R/aggreswmp.R
aggreswmp.Rd
diff --git a/reference/all_params.html b/reference/all_params.html index a2ee4c9..a5ad37f 100644 --- a/reference/all_params.html +++ b/reference/all_params.html @@ -33,7 +33,7 @@

Import current station records from the CDMO

- Source: R/all_params.R + Source: R/all_params.R
all_params.Rd
diff --git a/reference/all_params_dtrng.html b/reference/all_params_dtrng.html index 57258f3..992ada8 100644 --- a/reference/all_params_dtrng.html +++ b/reference/all_params_dtrng.html @@ -33,7 +33,7 @@

Get CDMO records within a date range

- Source: R/all_params_dtrng.R + Source: R/all_params_dtrng.R
all_params_dtrng.Rd
diff --git a/reference/apacpnut.html b/reference/apacpnut.html index aa0438a..c9b620d 100644 --- a/reference/apacpnut.html +++ b/reference/apacpnut.html @@ -33,7 +33,7 @@

Example nutrient data for Apalachicola Bay Cat Point station.

- Source: R/swmpr_misc.R + Source: R/swmpr_misc.R
apacpnut.Rd
diff --git a/reference/apacpwq.html b/reference/apacpwq.html index 811116c..b363877 100644 --- a/reference/apacpwq.html +++ b/reference/apacpwq.html @@ -33,7 +33,7 @@

Example water quality data for Apalachicola Bay Cat Point station.

- Source: R/swmpr_misc.R + Source: R/swmpr_misc.R
apacpwq.Rd
diff --git a/reference/apadbwq.html b/reference/apadbwq.html index 2704036..37af220 100644 --- a/reference/apadbwq.html +++ b/reference/apadbwq.html @@ -33,7 +33,7 @@

Example water quality data for Apalachicola Bay Dry Bar station.

- Source: R/swmpr_misc.R + Source: R/swmpr_misc.R
apadbwq.Rd
diff --git a/reference/apaebmet.html b/reference/apaebmet.html index aabbfc7..7752439 100644 --- a/reference/apaebmet.html +++ b/reference/apaebmet.html @@ -33,7 +33,7 @@

Example weather data for Apalachicola Bay East Bay station.

- Source: R/swmpr_misc.R + Source: R/swmpr_misc.R
apaebmet.Rd
diff --git a/reference/calckl.html b/reference/calckl.html index b8bb18a..dd7ef4b 100644 --- a/reference/calckl.html +++ b/reference/calckl.html @@ -33,7 +33,7 @@

Calculate oxygen mass transfer coefficient

- Source: R/calckl.R + Source: R/calckl.R
calckl.Rd
diff --git a/reference/cens_id.html b/reference/cens_id.html index 1b7b0e0..5461f1e 100644 --- a/reference/cens_id.html +++ b/reference/cens_id.html @@ -33,7 +33,7 @@

Flag observations above/below detection limits

- Source: R/cens_id.R + Source: R/cens_id.R
cens_id.Rd
diff --git a/reference/comb.html b/reference/comb.html index 3f31755..4449466 100644 --- a/reference/comb.html +++ b/reference/comb.html @@ -33,7 +33,7 @@

Combine swmpr data

- Source: R/comb.R + Source: R/comb.R
comb.Rd
diff --git a/reference/decomp.html b/reference/decomp.html index 7edea79..e2f6dc6 100644 --- a/reference/decomp.html +++ b/reference/decomp.html @@ -33,7 +33,7 @@

Simple trend decomposition

- Source: R/decomp.R + Source: R/decomp.R
decomp.Rd
diff --git a/reference/decompTs.html b/reference/decompTs.html index 24d4b6e..9a03261 100644 --- a/reference/decompTs.html +++ b/reference/decompTs.html @@ -33,7 +33,7 @@

Decompose a time series

- Source: R/decompTs.R + Source: R/decompTs.R
decompTs.Rd
diff --git a/reference/decomp_cj.html b/reference/decomp_cj.html index 859d615..ebcf781 100644 --- a/reference/decomp_cj.html +++ b/reference/decomp_cj.html @@ -33,7 +33,7 @@

Simple trend decomposition of monthly swmpr data

- Source: R/decomp_cj.R + Source: R/decomp_cj.R
decomp_cj.Rd
diff --git a/reference/ecometab.html b/reference/ecometab.html index 8743426..9b2964c 100644 --- a/reference/ecometab.html +++ b/reference/ecometab.html @@ -33,7 +33,7 @@

Ecosystem metabolism

- Source: R/ecometab.R + Source: R/ecometab.R
ecometab.Rd
diff --git a/reference/gradcols.html b/reference/gradcols.html index f9326b6..7530091 100644 --- a/reference/gradcols.html +++ b/reference/gradcols.html @@ -33,7 +33,7 @@

Get colors for plots

- Source: R/gradcols.R + Source: R/gradcols.R
gradcols.Rd
diff --git a/reference/hist.swmpr.html b/reference/hist.swmpr.html index 663a94d..6521274 100644 --- a/reference/hist.swmpr.html +++ b/reference/hist.swmpr.html @@ -33,7 +33,7 @@

Plot swmpr using a histogram

- Source: R/hist.R + Source: R/hist.R
hist.swmpr.Rd
diff --git a/reference/import_local.html b/reference/import_local.html index ac2a6fc..df3a2b6 100644 --- a/reference/import_local.html +++ b/reference/import_local.html @@ -33,7 +33,7 @@

Import local CDMO data

- Source: R/import_local.R + Source: R/import_local.R
import_local.Rd
diff --git a/reference/map_reserve.html b/reference/map_reserve.html index 9aebe16..a9db4b0 100644 --- a/reference/map_reserve.html +++ b/reference/map_reserve.html @@ -33,7 +33,7 @@

Map a reserve

- Source: R/map_reserve.R + Source: R/map_reserve.R
map_reserve.Rd
diff --git a/reference/metab_day.html b/reference/metab_day.html index 55f07ec..d7e716b 100644 --- a/reference/metab_day.html +++ b/reference/metab_day.html @@ -33,7 +33,7 @@

Identify metabolic days in a time series

- Source: R/metab_day.R + Source: R/metab_day.R
metab_day.Rd
diff --git a/reference/na.approx.swmpr.html b/reference/na.approx.swmpr.html index 1eafa17..ee2f8ae 100644 --- a/reference/na.approx.swmpr.html +++ b/reference/na.approx.swmpr.html @@ -33,7 +33,7 @@

Linearly interpolate gaps

- Source: R/na.approx.R + Source: R/na.approx.R
na.approx.swmpr.Rd
diff --git a/reference/overplot.html b/reference/overplot.html index 883d20c..c0e93d7 100644 --- a/reference/overplot.html +++ b/reference/overplot.html @@ -33,7 +33,7 @@

Plot multiple SWMP time series on the same y-axis

- Source: R/overplot.R + Source: R/overplot.R
overplot.Rd
diff --git a/reference/oxySol.html b/reference/oxySol.html index 7608911..384232f 100644 --- a/reference/oxySol.html +++ b/reference/oxySol.html @@ -33,7 +33,7 @@

Dissolved oxygen at saturation

- Source: R/oxySol.R + Source: R/oxySol.R
oxySol.Rd
diff --git a/reference/param_names.html b/reference/param_names.html index d45ec05..cd7f83b 100644 --- a/reference/param_names.html +++ b/reference/param_names.html @@ -33,7 +33,7 @@

Get parameters of a given type

- Source: R/param_names.R + Source: R/param_names.R
param_names.Rd
diff --git a/reference/parser.html b/reference/parser.html index 8d27155..455bef8 100644 --- a/reference/parser.html +++ b/reference/parser.html @@ -33,7 +33,7 @@

Parse web results for swmpr

- Source: R/parser.R + Source: R/parser.R
parser.Rd
diff --git a/reference/plot.swmpr.html b/reference/plot.swmpr.html index 1b2cb31..030fc7e 100644 --- a/reference/plot.swmpr.html +++ b/reference/plot.swmpr.html @@ -33,7 +33,7 @@

Plot swmpr data

- Source: R/plot.R + Source: R/plot.R
plot.swmpr.Rd
diff --git a/reference/plot_metab.html b/reference/plot_metab.html index a3463ff..6824cd5 100644 --- a/reference/plot_metab.html +++ b/reference/plot_metab.html @@ -33,7 +33,7 @@

Plot ecosystem metabolism for a swmpr object

- Source: R/plot_metab.R + Source: R/plot_metab.R
plot_metab.Rd
diff --git a/reference/plot_quants.html b/reference/plot_quants.html index e77bc48..614fbc9 100644 --- a/reference/plot_quants.html +++ b/reference/plot_quants.html @@ -33,7 +33,7 @@

Create a plot of data for a single year overlaid on historical data.

- Source: R/plot_quants.R + Source: R/plot_quants.R
plot_quants.Rd
diff --git a/reference/plot_summary.html b/reference/plot_summary.html index 37f3e61..da9266d 100644 --- a/reference/plot_summary.html +++ b/reference/plot_summary.html @@ -33,7 +33,7 @@

Plot graphical summaries of SWMP data

- Source: R/plot_summary.R + Source: R/plot_summary.R
plot_summary.Rd
diff --git a/reference/plot_wind.html b/reference/plot_wind.html index 772500a..419598f 100644 --- a/reference/plot_wind.html +++ b/reference/plot_wind.html @@ -33,7 +33,7 @@

Create a wind rose

- Source: R/plot_wind.R + Source: R/plot_wind.R
plot_wind.Rd
diff --git a/reference/qaqc.html b/reference/qaqc.html index 967e7de..48f4f0f 100644 --- a/reference/qaqc.html +++ b/reference/qaqc.html @@ -33,7 +33,7 @@

QAQC filtering for SWMP data

- Source: R/qaqc.R + Source: R/qaqc.R
qaqc.Rd
diff --git a/reference/qaqcchk.html b/reference/qaqcchk.html index e726ec9..340894d 100644 --- a/reference/qaqcchk.html +++ b/reference/qaqcchk.html @@ -33,7 +33,7 @@

Summary of QAQC flags in SWMP data

- Source: R/qaqcchk.R + Source: R/qaqcchk.R
qaqcchk.Rd
diff --git a/reference/rem_reps.html b/reference/rem_reps.html index 51725de..d87090c 100644 --- a/reference/rem_reps.html +++ b/reference/rem_reps.html @@ -33,7 +33,7 @@

Remove replicates in nutrient data

- Source: R/rem_reps.R + Source: R/rem_reps.R
rem_reps.Rd
diff --git a/reference/setstep.html b/reference/setstep.html index 12e322b..52ba628 100644 --- a/reference/setstep.html +++ b/reference/setstep.html @@ -33,7 +33,7 @@

Format a swmpr time vector

- Source: R/setstep.R + Source: R/setstep.R
setstep.Rd
diff --git a/reference/single_param.html b/reference/single_param.html index fce1bf5..92755fb 100644 --- a/reference/single_param.html +++ b/reference/single_param.html @@ -33,7 +33,7 @@

Get CDMO records for a single parameter

- Source: R/single_param.R + Source: R/single_param.R
single_param.Rd
diff --git a/reference/site_codes.html b/reference/site_codes.html index 2e81b66..4187d69 100644 --- a/reference/site_codes.html +++ b/reference/site_codes.html @@ -33,7 +33,7 @@

Obtain metadata for all stations

- Source: R/site_codes.R + Source: R/site_codes.R
site_codes.Rd
diff --git a/reference/site_codes_ind.html b/reference/site_codes_ind.html index cbeef54..e5e252f 100644 --- a/reference/site_codes_ind.html +++ b/reference/site_codes_ind.html @@ -33,7 +33,7 @@

Obtain metadata for a single reserve

- Source: R/site_codes_ind.R + Source: R/site_codes_ind.R
site_codes_ind.Rd
diff --git a/reference/smoother.html b/reference/smoother.html index 06815fe..60129e3 100644 --- a/reference/smoother.html +++ b/reference/smoother.html @@ -33,7 +33,7 @@

Smooth swmpr data

- Source: R/smoother.R + Source: R/smoother.R
smoother.Rd
diff --git a/reference/stat_locs.html b/reference/stat_locs.html index 6e921d6..86a299d 100644 --- a/reference/stat_locs.html +++ b/reference/stat_locs.html @@ -33,7 +33,7 @@

Locations of NERRS sites

- Source: R/swmpr_misc.R + Source: R/swmpr_misc.R
stat_locs.Rd
diff --git a/reference/subset.swmpr.html b/reference/subset.swmpr.html index d0f4855..7903523 100644 --- a/reference/subset.swmpr.html +++ b/reference/subset.swmpr.html @@ -33,7 +33,7 @@

Subset a swmpr object

- Source: R/subset.R + Source: R/subset.R
subset.swmpr.Rd
diff --git a/reference/swmpr.html b/reference/swmpr.html index 07627f9..4213470 100644 --- a/reference/swmpr.html +++ b/reference/swmpr.html @@ -33,7 +33,7 @@

Create a swmpr object

- Source: R/swmpr.R + Source: R/swmpr.R
swmpr.Rd
diff --git a/reference/time_vec.html b/reference/time_vec.html index 7113414..6156089 100644 --- a/reference/time_vec.html +++ b/reference/time_vec.html @@ -33,7 +33,7 @@

Format SWMP datetimestamp

- Source: R/time_vec.R + Source: R/time_vec.R
time_vec.Rd