Remove embedded native libraries from JARs

[Akirathan]

The list of native libraries embedded within JARs that we distribute can be found at https://github.com/enso-org/enso/blob/e0252714201dc54e7fc8e6c39e6ed381ea1c0146/test/Base_Tests/data/native_libs.json introduced by #13073. This is an umbrella issue to remove various embedded native libraries from these JARs and move them to the proper polyglot/lib directory.

For all the subissues:

• If possible, make sure there are no native libraries embedded within JARs
  • Extract the native libraries to their corresponding polyglot/lib directory.
• At least ensure there are no native libraries for different platforms.

References:

• https://github.com/orgs/enso-org/discussions/12446#discussioncomment-13144401
• Native libraries from packages are not copied #13101

Related:

• Remove JLine _native libraries_ from JARs and native enso launcher #12449
• Remove duplicated .so libraries from AppImage & other distributions #12557

Created from comments:

• Check native libraries bundled in JARs #13073 (comment)
• Check native libraries bundled in JARs #13073 (comment)