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[FEATURE] Enhance core_pan module #179

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@cb-Hades

Description

@cb-Hades

The core_pan module contains some rudimentary functions for building and comparing core-pan models with other models. Extending this model would enable better curation of core-pan models and meaningful analysis of the core-pan content of other models.

Discussion Points

  1. Entity comparison

ISSUE:
Currently, the similarity of model entities is solely determined by the model IDs, which can be rather problematic as models do not necessarily use the same IDs/namespace. This is further complicated because even a namespace might change over time.

IDEAS:

  • comparison based on (single) database IDs/annotations
  • similarity search with a similarity cut-off (multi-annotation / feature search)

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