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- # SBTabEditor
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+ # SBTabEditor<sup >0.1.1</sup >
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+ <img align =" right " src =" src/main/resources/de/sbtab/view/Icon_256.png " />
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+
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+ ** Free, open-source application to help you read, write, manipulate and validate SBML files**
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The available information about biological systems increased strongly in the last decade and will
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- increase further as more advanced methods are developed. To store and distribute computer models of biological systems, it
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- was necessary to develop consistent data formats to store this information about an organism and
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+ increase further as more advanced methods are developed. < br > To store and distribute computer models of biological systems, it
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+ was necessary< br > to develop consistent data formats to store this information about an organism and
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the corresponding biochemical networks. One widely used format for this task is Systems Biology
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Markup Language ([ SBML] ( http://sbml.org ) ). However, this data format is not suitable for editing large
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- amounts of data. For this reason the table based data format SBtab was developed, up until now
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+ amounts of data. For this reason the table based data< br > format SBtab was developed, up until now
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there is no proper editor designed explicitly for SBtab, the aim of this project solves this problem
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by developing an extensible editor which can read, write and save SBtab and SBML data
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and display them in table form.
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+ ___________________________________________________________________________________________________________
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+ ## Authors
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+ [ Franziska Daumueller] ( https://github.com/FranziskaDaumueller ) ,
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+ [ Granit Guri] ( https://github.com/GranitGuri ) ,
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+ [ Melina Maier] ( https://github.com/MelinaMaier ) ,
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+ [ Anton Rabe] ( https://github.com/AntonJuliusRabe ) ,
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+ [ Julian Wanner] ( https://github.com/JuliWanner ) ,
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+ [ Mykola Zakharchuk] ( https://github.com/zakharc )
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+
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+ Supervisor:
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+ [ Dr. Andreas Draeger] ( https://github.com/draeger )
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## How to start
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In order to run JavaFX application, a valid JRE 8+ needed.
@@ -28,13 +42,7 @@ To create os-specific launcher/installer, call `mvn jfx:native`. Target folder:
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Running process is platform specific. Example ` ./sbmltab-x.x.x ` (running on Unix-like system)
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- ## Authors
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- Franziska Daumueller,
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- Granit Guri,
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- [ Melina Maier] ( https://github.com/MelinaMaier ) ,
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- [ Anton Rabe] ( https://github.com/AntonJuliusRabe ) ,
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- [ Julian Wanner] ( https://github.com/JuliWanner ) ,
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- [ Mykola Zakharchuk] ( https://github.com/zakharc )
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+ ## Third-party libraries, which we are using:
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+
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+ [ JSBML] ( https://github.com/sbmlteam/jsbml )
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- Supervisor:
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- [ Dr. Andreas Draeger] ( https://github.com/draeger )
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