How to connect my postges database with logstash

[nhluan]

Problem description

I cannot understand how to my postgres database which is running by container to connect with logstash and then, they can display on the kibana. So, when I set up my logstash.conf and run them. I have received the error => [2024-04-05T06:31:40,600][ERROR][logstash.config.sourceloader] No configuration found in the configured sources. And my target is how to connect postgres database with logstash with this source.

Extra information

I have not change anything file or structure what I have cloned from this repository.

`logstash.conf`
input {
   jdbc {
	jdbc_connection_string => "jdbc:postgresql://172.17.0.1:5552/elife_loyalty_dev"
	jdbc_user => "admin"
    jdbc_driver_library => "/home/luan/NHLuan/postgresql-42.6.2.jar"
    jdbc_driver_class => "org.postgresql.Driver"
    jdbc_password => "forSureNotTheRealPassword"
    statement => "SELECT * from Admin"
}

## Add your filters / logstash plugins configuration here

output {
	stdout { codec => json_lines }
	elasticsearch {
		hosts => "elasticsearch:9200"
		user => "logstash_internal"
		password => "${LOGSTASH_INTERNAL_PASSWORD}"
	}
}

Stack configuration

Docker setup

version: '3.7'

services:

  # The 'setup' service runs a one-off script which initializes users inside
  # Elasticsearch — such as 'logstash_internal' and 'kibana_system' — with the
  # values of the passwords defined in the '.env' file. It also creates the
  # roles required by some of these users.
  #
  # This task only needs to be performed once, during the *initial* startup of
  # the stack. Any subsequent run will reset the passwords of existing users to
  # the values defined inside the '.env' file, and the built-in roles to their
  # default permissions.
  #
  # By default, it is excluded from the services started by 'docker compose up'
  # due to the non-default profile it belongs to. To run it, either provide the
  # '--profile=setup' CLI flag to Compose commands, or "up" the service by name
  # such as 'docker compose up setup'.
  setup:
    profiles:
      - setup
    build:
      context: setup/
      args:
        ELASTIC_VERSION: ${ELASTIC_VERSION}
    init: true
    volumes:
      - ./setup/entrypoint.sh:/entrypoint.sh:ro,Z
      - ./setup/lib.sh:/lib.sh:ro,Z
      - ./setup/roles:/roles:ro,Z
    environment:
      ELASTIC_PASSWORD: ${ELASTIC_PASSWORD:-}
      LOGSTASH_INTERNAL_PASSWORD: ${LOGSTASH_INTERNAL_PASSWORD:-}
      KIBANA_SYSTEM_PASSWORD: ${KIBANA_SYSTEM_PASSWORD:-}
      METRICBEAT_INTERNAL_PASSWORD: ${METRICBEAT_INTERNAL_PASSWORD:-}
      FILEBEAT_INTERNAL_PASSWORD: ${FILEBEAT_INTERNAL_PASSWORD:-}
      HEARTBEAT_INTERNAL_PASSWORD: ${HEARTBEAT_INTERNAL_PASSWORD:-}
      MONITORING_INTERNAL_PASSWORD: ${MONITORING_INTERNAL_PASSWORD:-}
      BEATS_SYSTEM_PASSWORD: ${BEATS_SYSTEM_PASSWORD:-}
    networks:
      - elk
    depends_on:
      - elasticsearch

  elasticsearch:
    build:
      context: elasticsearch/
      args:
        ELASTIC_VERSION: ${ELASTIC_VERSION}
    volumes:
      - ./elasticsearch/config/elasticsearch.yml:/usr/share/elasticsearch/config/elasticsearch.yml:ro,Z
      - elasticsearch:/usr/share/elasticsearch/data:Z
    ports:
      - 9200:9200
      - 9300:9300
    environment:
      node.name: elasticsearch
      ES_JAVA_OPTS: -Xms512m -Xmx512m
      # Bootstrap password.
      # Used to initialize the keystore during the initial startup of
      # Elasticsearch. Ignored on subsequent runs.
      ELASTIC_PASSWORD: ${ELASTIC_PASSWORD:-}
      # Use single node discovery in order to disable production mode and avoid bootstrap checks.
      # see: https://www.elastic.co/guide/en/elasticsearch/reference/current/bootstrap-checks.html
      discovery.type: single-node
    networks:
      - elk
    restart: unless-stopped

  logstash:
    build:
      context: logstash/
      args:
        ELASTIC_VERSION: ${ELASTIC_VERSION}
    volumes:
      - ./logstash/config/logstash.yml:/usr/share/logstash/config/logstash.yml:ro,Z
      - ./logstash/pipeline:/usr/share/logstash/pipeline:ro,Z
    ports:
      - 5044:5044
      - 50000:50000/tcp
      - 50000:50000/udp
      - 9600:9600
    environment:
      LS_JAVA_OPTS: -Xms256m -Xmx256m
      LOGSTASH_INTERNAL_PASSWORD: ${LOGSTASH_INTERNAL_PASSWORD:-}
    networks:
      - elk
    depends_on:
      - elasticsearch
    restart: unless-stopped

  kibana:
    build:
      context: kibana/
      args:
        ELASTIC_VERSION: ${ELASTIC_VERSION}
    volumes:
      - ./kibana/config/kibana.yml:/usr/share/kibana/config/kibana.yml:ro,Z
    ports:
      - 5601:5601
    environment:
      KIBANA_SYSTEM_PASSWORD: ${KIBANA_SYSTEM_PASSWORD:-}
    networks:
      - elk
    depends_on:
      - elasticsearch
    restart: unless-stopped

networks:
  elk:
    driver: bridge

volumes:
  elasticsearch:

Container logs

$ docker-compose logs
2024-04-05 15:31:39 [2024-04-05T06:31:39,954][INFO ][logstash.runner          ] JVM bootstrap flags: [-Xms1g, -Xmx1g, -Djava.awt.headless=true, -Dfile.encoding=UTF-8, -Djruby.compile.invokedynamic=true, -XX:+HeapDumpOnOutOfMemoryError, -Djava.security.egd=file:/dev/urandom, -Dlog4j2.isThreadContextMapInheritable=true, -Dlogstash.jackson.stream-read-constraints.max-string-length=200000000, -Dlogstash.jackson.stream-read-constraints.max-number-length=10000, -Dls.cgroup.cpuacct.path.override=/, -Dls.cgroup.cpu.path.override=/, -Xms256m, -Xmx256m, -Djruby.regexp.interruptible=true, -Djdk.io.File.enableADS=true, --add-exports=jdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.file=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.parser=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED, --add-opens=java.base/java.security=ALL-UNNAMED, --add-opens=java.base/java.io=ALL-UNNAMED, --add-opens=java.base/java.nio.channels=ALL-UNNAMED, --add-opens=java.base/sun.nio.ch=ALL-UNNAMED, --add-opens=java.management/sun.management=ALL-UNNAMED, -Dio.netty.allocator.maxOrder=11]
2024-04-05 15:31:39 [2024-04-05T06:31:39,956][INFO ][logstash.runner          ] Jackson default value override `logstash.jackson.stream-read-constraints.max-string-length` configured to `200000000`
2024-04-05 15:31:39 [2024-04-05T06:31:39,957][INFO ][logstash.runner          ] Jackson default value override `logstash.jackson.stream-read-constraints.max-number-length` configured to `10000`
2024-04-05 15:31:40 [2024-04-05T06:31:40,122][WARN ][logstash.config.source.multilocal] Ignoring the 'pipelines.yml' file because modules or command line options are specified
2024-04-05 15:31:40 [2024-04-05T06:31:40,599][INFO ][logstash.config.source.local.configpathloader] No config files found in path {:path=>"/usr/share/logstash/config/usersync.conf"}
2024-04-05 15:31:40 [2024-04-05T06:31:40,600][ERROR][logstash.config.sourceloader] No configuration found in the configured sources.
2024-04-05 15:31:40 [2024-04-05T06:31:40,686][INFO ][logstash.agent           ] Successfully started Logstash API endpoint {:port=>9600, :ssl_enabled=>false}
2024-04-05 15:31:40 [2024-04-05T06:31:40,696][INFO ][logstash.runner          ] Logstash shut down.
2024-04-05 15:31:40 [2024-04-05T06:31:40,702][FATAL][org.logstash.Logstash    ] Logstash stopped processing because of an error: (SystemExit) exit
2024-04-05 15:31:40 org.jruby.exceptions.SystemExit: (SystemExit) exit
2024-04-05 15:31:40     at org.jruby.RubyKernel.exit(org/jruby/RubyKernel.java:808) ~[jruby.jar:?]
2024-04-05 15:31:40     at org.jruby.RubyKernel.exit(org/jruby/RubyKernel.java:767) ~[jruby.jar:?]
2024-04-05 15:31:40     at usr.share.logstash.lib.bootstrap.environment.<main>(/usr/share/logstash/lib/bootstrap/environment.rb:90) ~[?:?]
2024-04-05 15:31:41 Using bundled JDK: /usr/share/logstash/jdk
2024-04-05 15:31:55 Sending Logstash logs to /usr/share/logstash/logs which is now configured via log4j2.properties
2024-04-05 15:31:55 [2024-04-05T06:31:55,764][INFO ][logstash.runner          ] Log4j configuration path used is: /usr/share/logstash/config/log4j2.properties
2024-04-05 15:31:55 [2024-04-05T06:31:55,771][INFO ][logstash.runner          ] Starting Logstash {"logstash.version"=>"8.13.0", "jruby.version"=>"jruby 9.4.5.0 (3.1.4) 2023-11-02 1abae2700f OpenJDK 64-Bit Server VM 17.0.10+7 on 17.0.10+7 +indy +jit [x86_64-linux]"}
2024-04-05 15:31:55 [2024-04-05T06:31:55,774][INFO ][logstash.runner          ] JVM bootstrap flags: [-Xms1g, -Xmx1g, -Djava.awt.headless=true, -Dfile.encoding=UTF-8, -Djruby.compile.invokedynamic=true, -XX:+HeapDumpOnOutOfMemoryError, -Djava.security.egd=file:/dev/urandom, -Dlog4j2.isThreadContextMapInheritable=true, -Dlogstash.jackson.stream-read-constraints.max-string-length=200000000, -Dlogstash.jackson.stream-read-constraints.max-number-length=10000, -Dls.cgroup.cpuacct.path.override=/, -Dls.cgroup.cpu.path.override=/, -Xms256m, -Xmx256m, -Djruby.regexp.interruptible=true, -Djdk.io.File.enableADS=true, --add-exports=jdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.file=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.parser=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED, --add-exports=jdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED, --add-opens=java.base/java.security=ALL-UNNAMED, --add-opens=java.base/java.io=ALL-UNNAMED, --add-opens=java.base/java.nio.channels=ALL-UNNAMED, --add-opens=java.base/sun.nio.ch=ALL-UNNAMED, --add-opens=java.management/sun.management=ALL-UNNAMED, -Dio.netty.allocator.maxOrder=11]
2024-04-05 15:31:55 [2024-04-05T06:31:55,777][INFO ][logstash.runner          ] Jackson default value override `logstash.jackson.stream-read-constraints.max-string-length` configured to `200000000`
2024-04-05 15:31:55 [2024-04-05T06:31:55,777][INFO ][logstash.runner          ] Jackson default value override `logstash.jackson.stream-read-constraints.max-number-length` configured to `10000`
2024-04-05 15:31:55 [2024-04-05T06:31:55,991][WARN ][logstash.config.source.multilocal] Ignoring the 'pipelines.yml' file because modules or command line options are specified
2024-04-05 15:31:56 [2024-04-05T06:31:56,498][INFO ][logstash.config.source.local.configpathloader] No config files found in path {:path=>"/usr/share/logstash/config/usersync.conf"}
2024-04-05 15:31:56 [2024-04-05T06:31:56,499][ERROR][logstash.config.sourceloader] No configuration found in the configured sources.
2024-04-05 15:31:56 [2024-04-05T06:31:56,594][INFO ][logstash.agent           ] Successfully started Logstash API endpoint {:port=>9600, :ssl_enabled=>false}
2024-04-05 15:31:56 [2024-04-05T06:31:56,608][INFO ][logstash.runner          ] Logstash shut down.
2024-04-05 15:31:56 [2024-04-05T06:31:56,616][FATAL][org.logstash.Logstash    ] Logstash stopped processing because of an error: (SystemExit) exit
2024-04-05 15:31:56 org.jruby.exceptions.SystemExit: (SystemExit) exit
2024-04-05 15:31:56     at org.jruby.RubyKernel.exit(org/jruby/RubyKernel.java:808) ~[jruby.jar:?]
2024-04-05 15:31:56     at org.jruby.RubyKernel.exit(org/jruby/RubyKernel.java:767) ~[jruby.jar:?]
2024-04-05 15:31:56     at usr.share.logstash.lib.bootstrap.environment.<main>(/usr/share/logstash/lib/bootstrap/environment.rb:90) ~[?:?]
2024-04-05 15:31:57 Using bundled JDK: /usr/share/logstash/jdk

[antoineco]

@nhluan all containers of the ELK stack are inside their own bridge network named "elk":

docker-elk/docker-compose.yml

Lines 109 to 111 in f14c103

	networks:
	elk:
	driver: bridge

For them to be able to communicate with other containers, it is necessary to share a network. If your postgresql container is running in a different network (e.g. the default Docker bridge network), the components of the ELK stack can't access it.

Using a user-defined network provides a scoped network in which only containers attached to that network are able to communicate.
-- https://docs.docker.com/network/drivers/bridge/

You can connect your postgresql container to the "elk" network and see if you are able to reach it.

For this, start by listing the available networks on your host:

docker network ls

Then list your containers to identify the postgresql container:

docker container ls

Finally, attach the postgresql container to the "elk" network:

docker network connect --alias my-database ELK_NETWORK PSQL_CONTAINER

After that, you should be able to change your Logstash configuration to use the following connection string: jdbc:postgresql://my-database:5552.

[nhluan]

Thank you, @antoineco for your response. By the way, I am encountering an issue when running my Docker compose with an ELK source using the new configuration I presented. (my structure based on your ELK source and make sure I don't change anything about position or something). And it's giving me an error indicating that it can't my configuration with logstash postgres. Any insight on this? (my error: [2024-04-05T06:31:40,600][ERROR][logstash.config.sourceloader] No configuration found in the configured sources.).
Additional, except for the jdbc_connection_string, Are all the parameters I have set up above correct, right?