Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Implement better logging for PSM ID to spectrum ID matching #158

Open
RalfG opened this issue Jul 17, 2024 · 1 comment
Open

Implement better logging for PSM ID to spectrum ID matching #158

RalfG opened this issue Jul 17, 2024 · 1 comment
Labels
enhancement

Comments

@RalfG
Copy link
Member

RalfG commented Jul 17, 2024

Currently, it is not always clear whether matching PSMs to spectra (potentially with psm_id_pattern and spectrum_id_pattern) was successful. We can use the precursor m/z values from the PSM file (theoretical) and from the spectrum file (observed) to validate matching based on the IDs. If m/z's deviate too much, a warning should be logged.
@RalfG
Copy link
Member Author

RalfG commented Aug 2, 2024

Partially addressed in #162

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@RalfG