Description
Hi there,
I have set up the CombineTool code on lxplus according to the instructions in the README for this repo (CMSSW_10_2_13 and Combine tag v8.2.0), but I see an error related to the numpy installation. Is this a known problem? And is there a workaround?
Thanks,
Jennet
Here is an example command and the accompanying error:
[jdickins@lxplus795 2016-prefit]$ combineTool.py -M Impacts -d $modelfile -m 125 --robustFit 1 --doInitialFit -t -1 --setParameters rggF=1,rVBF=1,rZbb=1
Traceback (most recent call last):
File "/afs/cern.ch/work/j/jdickins/hbb-prod-modes/test/CMSSW_10_2_13/bin/slc7_amd64_gcc700/combineTool.py", line 8, in
from CombineHarvester.CombineTools.combine.ImpactsFromScans import ImpactsFromScans
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/afs/cern.ch/work/j/jdickins/hbb-prod-modes/test/CMSSW_10_2_13/python/CombineHarvester/CombineTools/combine/ImpactsFromScans.py", line 15, in
from numpy import matrix
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/cvmfs/atlas.cern.ch/repo/sw/software/21.2/AnalysisBaseExternals/21.2.25/InstallArea/x86_64-slc6-gcc62-opt/lib/python2.7/site-packages/numpy-1.13.3-py2.7-linux-x86_64.egg/numpy/init.py", line 142, in
from . import add_newdocs
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/cvmfs/atlas.cern.ch/repo/sw/software/21.2/AnalysisBaseExternals/21.2.25/InstallArea/x86_64-slc6-gcc62-opt/lib/python2.7/site-packages/numpy-1.13.3-py2.7-linux-x86_64.egg/numpy/add_newdocs.py", line 13, in
from numpy.lib import add_newdoc
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/cvmfs/atlas.cern.ch/repo/sw/software/21.2/AnalysisBaseExternals/21.2.25/InstallArea/x86_64-slc6-gcc62-opt/lib/python2.7/site-packages/numpy-1.13.3-py2.7-linux-x86_64.egg/numpy/lib/init.py", line 8, in
from .type_check import *
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/cvmfs/atlas.cern.ch/repo/sw/software/21.2/AnalysisBaseExternals/21.2.25/InstallArea/x86_64-slc6-gcc62-opt/lib/python2.7/site-packages/numpy-1.13.3-py2.7-linux-x86_64.egg/numpy/lib/type_check.py", line 11, in
import numpy.core.numeric as _nx
File "/cvmfs/cms.cern.ch/slc7_amd64_gcc700/lcg/root/6.12.07-gnimlf5/lib/ROOT.py", line 318, in _importhook
return _orig_ihook( name, *args, **kwds )
File "/cvmfs/atlas.cern.ch/repo/sw/software/21.2/AnalysisBaseExternals/21.2.25/InstallArea/x86_64-slc6-gcc62-opt/lib/python2.7/site-packages/numpy-1.13.3-py2.7-linux-x86_64.egg/numpy/core/init.py", line 26, in
raise ImportError(msg)
ImportError:
Importing the multiarray numpy extension module failed. Most
likely you are trying to import a failed build of numpy.
If you're working with a numpy git repo, try git clean -xdf (removes all
files not under version control). Otherwise reinstall numpy.
Original error was: libptf77blas.so.3: cannot open shared object file: No such file or directory