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Generate and store sequencing run Qiime artifact immediately after run upload #464

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adamcantor22 opened this issue Jan 18, 2024 · 0 comments
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AnalysisTools enhancement Server Issue relates to the server

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@adamcantor22
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Is your feature request related to a problem? Please describe.
For every new study analysis, we first import as qiime artifacts every run that will be used in the analysis. This is pretty time-consuming, and the qiime artifact is the same every time.

Describe the solution you'd like
Add to the process of sequencing run uploads, so that a qiime artifact is generated as soon as the run is available to MMEDS. Then update qiime analysis to just copy over the relevant artifacts, rather than regenerating them.

@adamcantor22 adamcantor22 added enhancement Server Issue relates to the server AnalysisTools labels Jan 18, 2024
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AnalysisTools enhancement Server Issue relates to the server
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