.gitignore

# Compiled Object files
*.slo
*.lo
*.o

# Compiled Dynamic libraries
*.so
*.dylib

# Compiled Static libraries
*.lai
*.la
*.a

*.py[cod]

# C extensions
*.so

# Packages
*.egg
*.egg-info
dist
build
eggs
parts
bin
var
sdist
develop-eggs
.installed.cfg
lib64

# Installer logs
pip-log.txt

# Unit test / coverage reports
.coverage
.tox
nosetests.xml

# Translations
*.mo

# Mr Developer
.mr.developer.cfg
.project
.pydevproject

# vim
*.swp

# Mac file caches
.DS_Store

# PyCharm project settings
.idea/

.cache
build.log
mdtraj/rmsd/_rmsd.cpp
# export of libtheolib
/mdtraj/core/lib/*

result/
result

# Ignore LaTeX specific intermediate files
# Ignore auxiliary and intermediate files
*.aux
*.bbl
*.blg
*.log
*.toc
*.lof
*.lot
*.out
*.gz
*.fls
*.fdb_latexmk
*.snm
*.nav
*.vrb
*.synctex(busy)
*.synctex.gz
*.synctex(busy)
*.dvi
*.bcf
*.run.xml
*.nav
*.snm
*.xdv
*.xdv
*.thm
*.alg
*.acr
*.glg
*.glo
*.gls
*.ist
*.acn
*.out.ps
*.lof
*.lot
*.maf
*.idx
*.ilg
*.ind
*.toc.bak
*.blx.bib

# Ignore folders often used for intermediate output
/output
/build
/aux

# Ignore any LaTeX editor specific settings or temporary files
.vscode/
.idea/