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[New Format]: Older MountainSort MDA sortings file format #1202

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rly opened this issue Feb 15, 2025 · 1 comment · May be fixed by #1203
Open
2 tasks done

[New Format]: Older MountainSort MDA sortings file format #1202

rly opened this issue Feb 15, 2025 · 1 comment · May be fixed by #1203

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@rly
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rly commented Feb 15, 2025

What format would you like to see added to NeuroConv?

Older versions of MountainSort (versions 4 and earlier, I believe) generated a firings.mda file that contains channel indices, spike times, and unit ids.

SpikeInterface can read this. It would be nice if NeuroConv could also support this.

Does the format have any documentation?

https://mountainsort.readthedocs.io/en/latest/first_sort.html#format-of-the-firings-mda

Existing APIs for format

See spikeinterface sorting extractor

Do you have any example files you are willing to share?

I can ask the lab that i am working with, but given how popular mountainsort is/was, I am surprised to not see it here: https://gin.g-node.org/NeuralEnsemble/ephy_testing_data. Maybe it is under a different folder?

Do you have any interest in helping implement the feature?

Yes.

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@rly rly linked a pull request Feb 15, 2025 that will close this issue
@h-mayorquin
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Relevant:
#1132
#961

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