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<!DOCTYPE html>
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Brian M Schilder </h2>
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<ul class="nav navbar-nav navbar-right">
<li class="active"><a href="#home">Home</a></li>
<li><a href="#about">About</a></li>
<li><a href="#skills">Skills</a></li>
<li><a href="#portfolio">Research</a></li>
<li><a href="#timeline">Timeline</a></li>
<li><a href="#artwork">Artwork</a></li>
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<h2 class="hero-title"><span>B</span>rian <span>M</span> <span>S</span>childer</h2>
<!-- <a href="#" class="btn btn-default btn-lg left-btn">Purchase Now</a> -->
<a href="#about" class="btn btn-main btn-lg">Multi-disciplinary researcher</a>
</div>
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<div class="wheel"></div>
</div>
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</section>
<section class="about">
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<div id="about" class="section-title st-center">
<p>About Me</p>
<h1>Passionately pursuing research to improve human lives</h1>
</div>
<div class="row">
<div class="col-md-6 about_col1">
<div style="border-radius: 50px;">
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<img src="./photos/Imperial_headshot_bright.jpg" class="rounded" style="border-radius: 100px; padding:50px">
</div>
<h2>
<p style="color:white">PhD Candidate</p>
</h2>
<h3><a href="https://www.neurogenomics.co.uk/", target="_blank">Neurogenomics Lab</a></h3>
<h3><a href="https://www.imperial.ac.uk/dementia-research-institute" target="_blank">
UK Dementia Research Institute</a></h3>
<h3><a href="https://www.imperial.ac.uk/" target="_blank">Imperial College London</a></h3>
<h3><a href="https://www.imperial.ac.uk/brain-sciences/" target="_blank">
Department of Brain Sciences</a></h3>
<h3><a href="https://www.imperial.ac.uk/medicine/" target="_blank">
Faculty of Medicine</a></h3>
<a href="https://goo.gl/maps/Uqfu3kiFqGFVLk9r5" target="_blank">
<h4><i class="fa fa-map-marker" aria-hidden="true"></i>
Sir Michael Uren Hub<br>
86 Wood Ln, London W12 0BZ
</h4>
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<br><br>
<h2 style="color:white">Affiliations</h2>
<div style="background-color: rgba(255,255,255, 0.9); border-radius: 5px;">
<a href="https://ukdri.ac.uk/" target="_blank">
<img src="./logos/UKDRI.svg" id="UKDRI_logo" alt="" class="img-responsive">
</a>
<br>
<a href="https://www.imperial.ac.uk/" target="_blank">
<img src="./logos/Imperial_noBG.png" id="ICL_logo" alt="" class="img-responsive">
</a>
<br>
<a href="http://demondementia.com/" target="_blank">
<img src="./logos/DEMON.png" id="DEMON_logo" alt="" class="img-responsive">
</a>
</div>
<br><br><br>
</div>
<div class="col-md-6" style="border-left-style: solid; border-left-width: .5px; border-left-color: gray">
<p style="color: rgba(255, 255, 255, 0.9); letter-spacing: 1px;">As a researcher with experience in a variety of fields, I am a believer in the innovation and insights that can be gained from highly inter-disciplinary research.
In 2011, I earned my ScB in Cognitive Neuroscience from
<a href="https://www.brown.edu/academics/cognitive-linguistic-psychological-sciences" target="_blank">Brown University (Providence, RI)</a>.
The core focus of my work was and continues to be the investigation of human susceptibility to diseases and disorders in order to impact human health and alleviate suffering.
<br><br>
In order to uncover the evolutionary underpinnings of human-specific cognitive abilities and neurobiological susceptibilities,
I then took on jobs in two labs simultaneously (as Lab Manager and Research Assistant, respectively) at <a href="https://www.gwu.edu" target="_blank">The George Washington University (Washington, DC)</a>.
At the same institution, I went on to earn my MPhil in Human Paleobiology (2017) investigating the neuroanatomical, transcriptomic and genomic evolution of the hippocampus, adult neurogenesis and episodic memory.
During this time, I became increasingly interested in applying programming and computational techniques to expand the scale and scope of the questions that I’m able to address.
<br><br>
In the pursuit of further advancing my skills as a computational researcher,
I thereafter accepted a position as a Bioinformatician at the <a href="https://icahn.mssm.edu" target="_blank">Icahn School of Medicine at Mount Sinai (New York City, NY)</a>.
There, in the labs of <a href="https://labs.icahn.mssm.edu/maayanlab/" target="_blank">Dr. Avi Ma'ayan</a> and
<a href="www.rajlab.org" target="_blank">Dr. Towfique Raj</a>,
I helped to develop a number of open-access bioinformatics tools; e.g.
<a href="https://amp.pharm.mssm.edu/X2K" target="_blank">X2K Web</a>,
<a href="https://amp.pharm.mssm.edu/geneshot/" target="_blank">Geneshot</a>,
<a href="https://github.com/RajLabMSSM/catalogueR" target="_blank">catalogueR</a> and
<a href="https://github.com/RajLabMSSM/echolocatoR" target="_blank">echolocatoR</a>.
My collaborators and I also published work revealing cell-type-specific neurogenomic mechanisms underlying neurological conditions (e.g. Parkinson’s and Alzheimer’s Disease) through the application of statistical and machine learning techniques to large-scale multi-omics and clinical data.
<br><br>
I am now pursuing my PhD at the <a href="https://www.imperial.ac.uk/dementia-research-institute" target="_blank">UK Dementia Research Institute at Imperial College London</a>
within the <a href="https://www.neurogenomics.co.uk/", target="_blank">Neurogenomics Lab</a>.
<a href="https://www.imperial.ac.uk/dementia-research-institute/about-us/phd-students/brian-schilder/" target="_blank">The focus of my work</a>
is the application of statistical and machine learning techniques to multi-omics and clinical phenotypic data to accurately predict cell-type- and developmentally-contextualized effects of neurological diseases,
and ultimately identify effective therapeutics.
<br><br>
<i>You can learn more about my research experiences, publications, and tools in the <a href="#portfolio">Research Portfolio</a> and <a href="#timeline"> Timeline</a> sections.
You can also download my full CV below.
</i>
<br>
<hr style="width: 10%;">
<br>
</p>
<h3> <a href="./files/B.M. Schilder CV.pdf" download><i class="fa fa-file-pdf-o" aria-hidden="true"></i>
Download CV</a></h3>
<br><br>
</div>
</section>
<!-- Skills-->
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<div class="col-md-12">
<div class="section-title st-center">
<p>Core Qualifications & Skills</p>
</div>
<div class="row">
<div class="col-md-3">
<div class="st-feature">
<div class="st-feature-icon"><i class="fa fa-cog"></i></div>
<strong class="st-feature-title">Programming</strong>
<p>Rapidly learns new software & languages to solve problems & develop analytical
pipelines.</p>
</div>
</div>
<div class="col-md-3">
<div class="st-feature">
<div class="st-feature-icon"><i class="fa fa-bank"></i></div>
<strong class="st-feature-title">Research</strong>
<p>10+ years of highly multi-disciplinary dry lab, wet lab & field research.</p>
</div>
</div>
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<div class="st-feature">
<div class="st-feature-icon"><i class="fa fa-pencil-square"></i></div>
<strong class="st-feature-title">Scientific Writing</strong>
<p>Consistently presents scientific evidence in an organized, concise & effective
manner.</p>
</div>
</div>
<div class="col-md-3">
<div class="st-feature">
<div class="st-feature-icon"><i class="fa fa-comments-o"></i></div>
<strong class="st-feature-title">Communication</strong>
<p>Engaging speaker capable of distilling complex concepts for a wide range of
audiences.</p>
</div>
</div>
</div>
<div class="row">
<div class="col-md-3">
<div class="pricing-table">
<div class="pricing-header">
<div class="pt-name">Scripting</div>
</div>
<div class="pricing-body">
<ul>
<li><i class="fa fa-check"></i> Python <br><em>(e.g. Tensorflow, Keras,
Scikit-learn)</em></li>
<li><i class="fa fa-check"></i> R <br><em>(e.g. Bioconductor)</em></li>
<li><i class="fa fa-check"></i> UNIX / Bash</li>
</ul>
<div class="pricing-header">
<div class="pt-name">Web Development</div>
</div>
<ul>
<li><i class="fa fa-check"></i> Javascript <br><em>(e.g. Three.js, D3.js,
Bootstrap)</em></li>
<li><i class="fa fa-check"></i> HTML</li>
<li><i class="fa fa-check"></i> CSS</li>
</ul>
<div class="pricing-header">
<div class="pt-name">Databases</div>
</div>
<ul>
<li><i class="fa fa-check"></i> MongoDB</li>
<li><i class="fa fa-check"></i> SQL</li>
</ul>
</div>
</div>
</div>
<div class="col-md-3">
<div class="pricing-table">
<div class="pricing-header">
<div class="pt-name">Fields of Study</div>
</div>
<div class="pricing-body">
<ul>
<li><i class="fa fa-check"></i> Neuroscience</li>
<li><i class="fa fa-check"></i> AI & Machine Learning</li>
<li><i class="fa fa-check"></i> Systems Biology</li>
<li><i class="fa fa-check"></i> Bioinformatics</li>
<li><i class="fa fa-check"></i> Computational Biology</li>
<li><i class="fa fa-check"></i> Genomics</li>
<li><i class="fa fa-check"></i> Transcriptomics</li>
<li><i class="fa fa-check"></i> Biomedicine</li>
<li><i class="fa fa-check"></i> Developmental Cognition</li>
<li><i class="fa fa-check"></i> Human Origins & Biological Anthropology</li>
<li><i class="fa fa-check"></i> Evolutionary Phylogenetics</li>
<li><i class="fa fa-check"></i> Paleoclimatology & Ecology</li>
<li><i class="fa fa-check"></i> Running Biomechanics</li>
</ul>
</div>
</div>
</div>
<div class="col-md-3">
<div class="pricing-table">
<div class="pricing-header">
<div class="pt-name">Evidence</div>
</div>
<div class="pricing-body">
<ul>
<li><i class="fa fa-check"></i> 5 research grants (~$70,000) since 2016 </li>
<li><i class="fa fa-check"></i> 9 peer-reviewed scientific publications </li>
<li><i class="fa fa-check"></i> 15 international conference posters</li>
</ul>
</div>
</div>
</div>
<div class="col-md-3">
<div class="pricing-table">
<div class="pricing-header">
<div class="pt-name">Experience</div>
</div>
<div class="pricing-body">
<ul>
<li><i class="fa fa-check"></i> 3 conference podium presentations</li>
<li><i class="fa fa-check"></i> 14 conference poster presentations</li>
<li><i class="fa fa-check"></i> 10+ departmental presentations</li>
<li><i class="fa fa-check"></i> 5 college-level course guest lectures
<ul>
<li>Biological anthropology</li>
<li>Biopsychology</li>
<li>Evolutionary neuroscience</li>
<li>Computational biology & bioinformatics</li>
</ul>
</li>
<li><i class="fa fa-check"></i> 10+ science outreach programs since 2009</li>
</ul>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<hr>
<!-- ######### RESEARCH PORTFOLIO ############# -->
<section class="portfolio" id="portfolio">
<div class="container-fluid ">
<div class="row">
<div class="col-md-12 no-padding">
<div class="section-title st-center">
<p>Research Portfolio</p>
<h3 style="padding: 0 10%">Links to publications, tools, and/or websites
I've created or contributed to.</h3>
</div>
<div class="filter mb40">
<form id="filter">
<fieldset class="group">
<div class="row">
<label class="btn btn-default btn-main"><input type="radio" name="filter" value="all"
checked="checked">ALL</label>
</div>
<div class="row">
<h4>Subset by Content</h4>
<label class="btn btn-default"><input type="radio" name="filter" value="publications"><i
class="fa fa-book"></i> Publications</label>
<label class="btn btn-default"><input type="radio" name="filter" value="preprints"><i
class="fa fa-book"></i> Preprints</label>
<label class="btn btn-default"><input type="radio" name="filter" value="acknowledgements"><i
class="fa fa-book"></i> Acknowledgements</label>
<label class="btn btn-default"><input type="radio" name="filter" value="tools"><i class="fa fa-wrench"></i>
Tools & Software</label>
<label class="btn btn-default"><input type="radio" name="filter" value="code"><i class="fa fa-github"></i>
Source Code</label>
</div>
<div class="row">
<h4>Subset by Field</h4>
<label class="btn btn-default"><input type="radio" name="filter" value="Genomics">
Genomics</label>
<label class="btn btn-default"><input type="radio" name="filter" value="Computational Biology">
Computational Biology</label>
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Bioinformatics</label>
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Neuroscience</label>
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Biomedicine</label>
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Cognition</label>
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Human Evolution</label>
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<!-- #filter -->
<!-- .filter .mb40 -->
<div class="grid" id="portfolio-grid"></div>
</div>
</div>
</div>
</div>
<script>
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</section>
<section class="features-desc" id="timeline">
<div class="section-title st-center">
<p>Research Experience Timeline</p>
<h1>An interactive timeline detailing my key research experiences</h1>
<!-- <left><strong>Controls :</strong>
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<iframe src="https://time.graphics/embed?v=1&id=109212" frameborder="0" allowfullscreen></iframe>
<!-- <div id="front">FRONT</div>-->
</section>
<!-- ######### ARTWORK ########## -->
<section id="artwork">
<div class="section-title st-center">
<p>Artwork</p>
<h1>Science-related original artwork I've created over the years.</h1>
</div>
<div id="carouselExampleIndicators" class="carousel slide" data-ride="carousel">
<div class="carousel-inner">
<!-- Item 1 -->
<div class="carousel-item active">
<img class="d-block w-100" src="./images/artwork/wildfire_circle.png" alt="slide0">
<div class="carousel-caption d-none d-md-block">
<h2>Wildfire Circle</h2>
<p>
Awarded 2nd place in the
<a href="https://friedmanbrain.icahn.mssm.edu/art-of-the-brain/?fbclid=IwAR3AOREAeytcazg4XglJ3_6yVC0xX7RJ70_qzSgqzV1E3WyYqJyWKT9Bbr8" target="_blank">
2019 Art of the Brain, put on by the Mount Sinai’s Friedman Brain Institute.
</a>
<br>
Exhibited and auctioned at the
<a href="https://tallerlatino.org/about-the-grady-alexis-gallery" target="_blank">
Grady Alexis Gallery (New York City)
</a>, where all proceeds were donated to the
<a href="http://neuroscience.mssm.edu/diversityinneuroscience/" target="_blank">
Diversity in Neuroscience Initiative
</a>.
</p>
</div>
</div>
<!-- Item 2 -->
<div class="carousel-item">
<img class="d-block w-100" src="./images/artwork/BioPsych_cover.jpg" alt="slide1">
<div class="carousel-caption d-none d-md-block">
<h2>Wildfire Circle</h2>
<p>This work was also featured on the cover of
<a href="https://www.biologicalpsychiatryjournal.com/issue/S0006-3223(19)X0012-8#" target="_blank">
Biological Psychiatry (issue: July 15th 2020).
</a>
</p>
</div>
</div>
<!-- Item 3 -->
<div class="carousel-item">
<img class="d-block w-100" src="./images/artwork/wildfire.png" alt="slide1">
<div class="carousel-caption d-none d-md-block">
<h2>Wildfire</h2>
<p>Transcriptomic data from 16k+ individual brain cells (shown as points) after reducing the dimensionality with an autoencoder and UMAP.
5 million tracts are shown interconnecting these cells, where shorter tract length represents greater similarity in their molecular profiles.</p>
</div>
</div>
<!-- Item 4 -->
<div class="carousel-item">
<img class="d-block w-100" src="./images/artwork/clever_girl.jpg" alt="slide1">
<div class="carousel-caption d-none d-md-block">
<h2>"Clever Girl"</h2>
<p> It is a velociraptor using an API. What more could you possibly want? <br><em>(Acrylic on canvas)</em></p>
</div>
</div>
<!-- Item 5 -->
<div class="carousel-item">
<img class="d-block w-100" src="./images/brian_brain/neon_brain.png" alt="slide1">
<div class="carousel-caption d-none d-md-block">
<h2>Neon Brain</h2>
<p>Here's a 3D model of my brain.<br><em>(MRI scans rendered with <a href="https://surfer.nmr.mgh.harvard.edu" target="_blank">Freesurfer</a>)</em></p>
</div>
</div>
<!-- Item 6 -->
<div class="carousel-item">
<img class="d-block w-100" src="./images/brian_brain/gold_brain.png" alt="slide1">
<div class="carousel-caption d-none d-md-block">
<h2>Golden Brain</h2>
<p>Here's a 3D model of my brain....in GOLD! <br><em>(A medium I could never actually afford to make in real life)</em></p>
</div>
</div>
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</div>
<!-- 3D brain model! -->
<embed src="https://bschilder.github.io/BMSchilder/3D_brain.html" style="width:100%; height: 70vh;">
</section>
<!-- ######### Contact ########## -->
<section class="about">
<div id="contact" class="section-title black st-center">
<p>Contact</p>
<h1 style="color: rgba(255, 255, 255, 0.9);">Feel free to reach out anytime!</h1>
<div class="container">
<h3>Email : <a href='mailto:[email protected]'>brian_schilder [at] alumni.brown.edu</a></h3>
<br><br>
<a href="https://www.linkedin.com/in/brian-schilder/" target="_blank">
<img src="./logos/linkedIn.png" class="img-responsive">
</a>
<a href="https://github.com/bschilder" target="_blank">
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</a>
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</a>
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</a>
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</a>
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Created by Brian M. Schilder - © 2018
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