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Pull requests: broadinstitute/ABC-Enhancer-Gene-Prediction

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Pull requests list

Move activity to input
#249 by mayasheth was merged Feb 22, 2025 Loading…
Mitigate EmptyDataError race condition
#247 by kaybrand was merged Jan 31, 2025 Loading…
Added delay+retry capability to mitigate EmptyDataError race condition
#246 by kaybrand was closed Jan 31, 2025 Loading…
3
move hic-straw from pip to conda installation
#245 by mayasheth was merged Jan 17, 2025 Loading…
Update dev envs
#244 by mayasheth was merged Jan 12, 2025 Loading…
Update abcenv.yml
#243 by mayasheth was merged Jan 12, 2025 Loading…
1
enforce upper bound on cryptography package
#242 by mayasheth was merged Dec 7, 2024 Loading…
1
Update utils.smk
#229 by mayasheth was merged Jul 8, 2024 Loading…
1
Update README.md
#227 by atancoder was closed Jun 5, 2024 Loading…
Dev
#226 by atancoder was merged Jun 4, 2024 Loading…
Update circleci config.yml
#225 by atancoder was merged Jun 4, 2024 Loading…
utilize amazon link as the encode link leads to a segfault in CircleCI
#224 by atancoder was merged May 29, 2024 Loading…
clean up hic processing code
#221 by atancoder was merged May 8, 2024 Loading…
update bedpe file creation
#220 by atancoder was merged Apr 30, 2024 Loading…
update bedpe file format
#219 by atancoder was merged Apr 24, 2024 Loading…
update troubleshooting doc
#217 by atancoder was merged Apr 23, 2024 Loading…
update docs w/ troubleshooting. update release.yml
#213 by atancoder was merged Apr 2, 2024 Loading…
Dev
#210 by atancoder was merged Mar 23, 2024 Loading…
prepare for main merge
#209 by atancoder was merged Mar 22, 2024 Loading…
increase output timeout for circleci
#208 by atancoder was merged Mar 22, 2024 Loading…
Update from main
#205 by atancoder was closed Mar 8, 2024 Loading…
use distributed pytest
#204 by atancoder was merged Mar 8, 2024 Loading…
fix 1 of the tests to use powerlaw to improve memory consumption
#203 by atancoder was merged Mar 8, 2024 Loading…
Change some prediction column names of ABC
#202 by atancoder was merged Mar 8, 2024 Loading…
1
Fix qnorm bug Something isn't working
#201 by atancoder was merged Mar 7, 2024 Loading…
1
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