fix help which still mentioned js.

closes #141

api/api.go

@@ -105,7 +105,7 @@ type PostAnnotation struct {
 	Vms [8]*goluaez.State
 }
 
-// NewAnnotator returns an Annotator with the sources, seeded with some javascript.
+// NewAnnotator returns an Annotator with the sources, seeded with some lua.
 // If ends is true, it will annotate the 1 base ends of the interval as well as the
 // interval itself. If strict is true, when overlapping variants, they must share
 // the ref allele and at least 1 alt allele.

vcfanno.go

@@ -6,6 +6,7 @@ import (
 	"fmt"
 	"io"
 	"log"
+
 	//_ "net/http/pprof"
 	"os"
 	"runtime"
@@ -57,7 +58,7 @@ see: https://github.com/brentp/vcfanno
 	ends := flag.Bool("ends", false, "annotate the start and end as well as the interval itself.")
 	notstrict := flag.Bool("permissive-overlap", false, "annotate with an overlapping variant even it doesn't"+
 		" share the same ref and alt alleles. Default is to require exact match between variants.")
-	lua := flag.String("lua", "", "optional path to a file containing custom javascript functions to be used as ops")
+	lua := flag.String("lua", "", "optional path to a file containing custom lua functions to be used as ops")
 	base := flag.String("base-path", "", "optional base-path to prepend to annotation files in the config")
 	procs := flag.Int("p", 2, "number of processes to use.")
 	flag.Parse()