DESCRIPTION

Package: rdiversity
Type: Package
Title: Measurement and Partitioning of Similarity-Sensitive Biodiversity
Version: 2.2.0
Date: 2022-04-29
Authors@R: c(person("Sonia", "Mitchell", email = "sonia.mitchell@glasgow.ac.uk",
                  role = c("aut"), comment = c(ORCID = "0000-0003-1536-2066")),
             person("Richard", "Reeve", email = "richard.reeve@glasgow.ac.uk",
                  role = c("cre", "aut", "ths"), comment = c(ORCID = "0000-0003-2589-8091")),
             person("Tom", "White", email = "whitetomjames@gmail.com",
                  role = "ctb", comment = c(ORCID = "0000-0002-9639-3800")),
             person("Daniel", "Dörrhöfer", email = "ddo@openmailbox.org", role = "ctb"),
             person("Aaron", "Rudkin", email = "rudkin@ucla.edu", role = "ctb"))
Maintainer: Richard Reeve <richard.reeve@glasgow.ac.uk>
URL: https://github.com/boydorr/rdiversity
BugReports: https://github.com/boydorr/rdiversity/issues
Description: Provides a framework for the measurement and partitioning of
    the (similarity-sensitive) biodiversity of a metacommunity and its
    constituent subcommunities. Richard Reeve, et al. (2016) 
    <arXiv:1404.6520v3>.
License: GPL-3
Depends: R (>= 2.10)
Imports:
    methods,
    reshape2,
    stats,
    stringdist,
    utils
Suggests:
    ape,
    testthat,
    knitr,
    markdown,
    rmarkdown,
    covr
LazyData: true
RoxygenNote: 7.1.2
Encoding: UTF-8
VignetteBuilder: knitr
Collate: 
    'ancestral_nodes.R'
    'binary.R'
    'chainsaw.R'
    'check_partition.R'
    'check_phypartition.R'
    'check_similarity.R'
    'class-distance.R'
    'class-metacommunity.R'
    'class-powermean.R'
    'class-relativeentropy.R'
    'class-similarity.R'
    'descendant_tips.R'
    'similarity.R'
    'dist2sim.R'
    'distance.R'
    'metadiv.R'
    'subdiv.R'
    'metacommunity.R'
    'diversity-components.R'
    'diversity-measures.R'
    'gen2dist.r'
    'geneid.R'
    'genevec.R'
    'hs_parameters.R'
    'inddiv.R'
    'phy2branch.R'
    'phy2dist.R'
    'phy_abundance.R'
    'phy_struct.R'
    'power_mean.R'
    'powermean.R'
    'rdiversity-package.R'
    'relativeentropy.R'
    'repartition.R'
    'smatrix.R'
    'summarise.R'
    'tax2dist.R'
    'taxfac.R'
    'taxid.R'
    'taxmask.R'
    'taxvec.R'
    'tbar.R'
    'zmatrix.R'