diff --git a/ISSLScoreOfftargets/ISSLScoreOfftargets.cpp b/ISSLScoreOfftargets/ISSLScoreOfftargets.cpp index 557503a..5c7873c 100644 --- a/ISSLScoreOfftargets/ISSLScoreOfftargets.cpp +++ b/ISSLScoreOfftargets/ISSLScoreOfftargets.cpp @@ -79,7 +79,7 @@ int main(int argc, char** argv) } else { - fprintf(stderr, "Invalid scoring method. Acceptable options are: 'and', 'or', 'avg', 'mit', 'cfd'", argv[0]); + fprintf(stderr, "Invalid scoring method. Acceptable options are: 'and', 'or', 'avg', 'mit', 'cfd'"); exit(1); } @@ -173,8 +173,6 @@ int main(int argc, char** argv) /** End reading the index */ fclose(isslFp); - cout << "ISSL Index Loaded." << endl; - /** Prevent assessing an off-target site for multiple slices @@ -262,13 +260,13 @@ int main(int argc, char** argv) /** Begin scoring */ omp_set_num_threads(32); - //#pragma omp parallel + #pragma omp parallel { vector offtargetToggles(numOfftargetToggles); uint64_t* offtargetTogglesTail = offtargetToggles.data() + numOfftargetToggles - 1; /** For each candidate guide */ // TODO: update to openMP > v2 (Use clang compiler) - //#pragma omp for + #pragma omp for for (int searchIdx = 0; searchIdx < querySignatures.size(); searchIdx++) { auto searchSignature = querySignatures[searchIdx]; diff --git a/ISSLScoreOfftargetsMMF/CMakelists.txt b/ISSLScoreOfftargetsMMF/CMakeLists.txt similarity index 100% rename from ISSLScoreOfftargetsMMF/CMakelists.txt rename to ISSLScoreOfftargetsMMF/CMakeLists.txt diff --git a/ISSLScoreOfftargetsMMF/ISSLScoreOfftargetsMMF.cpp b/ISSLScoreOfftargetsMMF/ISSLScoreOfftargetsMMF.cpp index 5c8eb64..16a6d88 100644 --- a/ISSLScoreOfftargetsMMF/ISSLScoreOfftargetsMMF.cpp +++ b/ISSLScoreOfftargetsMMF/ISSLScoreOfftargetsMMF.cpp @@ -80,7 +80,7 @@ int main(int argc, char** argv) } else { - fprintf(stderr, "Invalid scoring method. Acceptable options are: 'and', 'or', 'avg', 'mit', 'cfd'", argv[0]); + fprintf(stderr, "Invalid scoring method. Acceptable options are: 'and', 'or', 'avg', 'mit', 'cfd'"); exit(1); } @@ -150,7 +150,6 @@ int main(int argc, char** argv) listSizePtr = static_cast(signaturePtr + offtargetsCount); } - cout << "ISSL Index Loaded." << endl;