The bioconda ont-modkit 0.6.2 package installs a binary that does not match upstream 0.6.2.
Reproduction:
$ mamba install -c bioconda ont-modkit=0.6.2
$ mamba list ont-modkit
ont-modkit 0.6.2 h7f49ad2_0 bioconda
$ modkit --version
modkit 0.6.1
$ modkit pileup --help | grep -E "io-threads|bgzf-threads"
(no output; flags are missing)
Compared to ONT's official prebuilt binary from
https://github.com/nanoporetech/modkit/releases/tag/v0.6.2
(dist_modkit_v0.6.2_2773aed):
$ modkit --version
modkit 0.6.2
$ modkit pileup --help | grep -E "io-threads|bgzf-threads"
--bgzf-threads <BGZF_THREADS>
--io-threads <IO_THREADS>
The bioconda build appears to have been tagged 0.6.2 but compiled from
0.6.1 source. Build hash: h7f49ad2_0.
Recipe: https://github.com/bioconda/bioconda-recipes/tree/master/recipes/ont-modkit
The bioconda ont-modkit 0.6.2 package installs a binary that does not match upstream 0.6.2.
Reproduction:
$ mamba install -c bioconda ont-modkit=0.6.2
$ mamba list ont-modkit
ont-modkit 0.6.2 h7f49ad2_0 bioconda
$ modkit --version
modkit 0.6.1
$ modkit pileup --help | grep -E "io-threads|bgzf-threads"
(no output; flags are missing)
Compared to ONT's official prebuilt binary from
https://github.com/nanoporetech/modkit/releases/tag/v0.6.2
(dist_modkit_v0.6.2_2773aed):
$ modkit --version
modkit 0.6.2
$ modkit pileup --help | grep -E "io-threads|bgzf-threads"
--bgzf-threads <BGZF_THREADS>
--io-threads <IO_THREADS>
The bioconda build appears to have been tagged 0.6.2 but compiled from
0.6.1 source. Build hash: h7f49ad2_0.
Recipe: https://github.com/bioconda/bioconda-recipes/tree/master/recipes/ont-modkit