Add recipe for scArches

[jdblischak]

• Original recipe generated using grayskull pypi scarches
• Added run_exports
• Follow-up to Add recipe for scHPL #50613

https://github.com/theislab/scarches
https://pypi.org/project/scArches/

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[jdblischak]

Main downside is that this package is quite large:

https://pypi.org/project/scArches/#files

[jdblischak]

FYI @theislab, please let me know if any of the scArches developers would like to be added as maintainers of the bioconda recipe

[jdblischak]

The pip check test failed:

scvi-tools 1.1.6 has requirement lightning<2.2,>=2.0, but you have lightning 2.4.0.

[jdblischak]

Unclear where this upper bound is coming from

The upstream package dropped the upper bound 5 months ago

scverse/scvi-tools@9b4277f
scverse/scvi-tools#2751

And the feedstock dropped the upper bound 2 weeks ago

conda-forge/scvi-tools-feedstock#52

The bioconda build installed the latest scvi-tools 1.1.6-pyhd8ed1ab_1

https://anaconda.org/conda-forge/scvi-tools/files?version=1.1.6

Which has a correct recipe, but the lightning<2.2 is still buried in the METADATA:

wget https://anaconda.org/conda-forge/scvi-tools/1.1.6/download/noarch/scvi-tools-1.1.6-pyhd8ed1ab_1.conda
cph extract scvi-tools-1.1.6-pyhd8ed1ab_1.conda
grep lightning scvi-tools-1.1.6-pyhd8ed1ab_1/info/recipe/meta.yaml
##     - lightning >=2.0
grep -R lightning scvi-tools-1.1.6-pyhd8ed1ab_1/site-packages/scvi_tools-1.1.6.dist-info/
## scvi-tools-1.1.6-pyhd8ed1ab_1/site-packages/scvi_tools-1.1.6.dist-info/METADATA:Requires-Dist: lightning<2.2,>=2.0
## scvi-tools-1.1.6-pyhd8ed1ab_1/site-packages/scvi_tools-1.1.6.dist-info/METADATA:Lightning](https://www.pytorclightning.ai/) and

[jdblischak]

Now running into conda-forge/scvi-tools-feedstock#57 (comment)

 scvi-tools 1.1.6.post2 has requirement anndata<=0.10.8,>=0.7.5, but you have anndata 0.10.9.

[jdblischak]

@BiocondaBot please add label

[jdblischak]

I rebased my PR onto master. Here is the passing Azure build from yesterday