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DESCRIPTION
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DESCRIPTION
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Package: cytofin
Title: Integrate CyTOF Datasets From Heterogeneous Sources
Version: 0.0.0.9000
Authors@R:
c(person(given = "Ben",
family = "Lo",
role = c("aut", "cre"),
email = "[email protected]"),
person(given = "Timothy",
family = "Keyes",
role = "aut",
email = "[email protected]",
comment = c(ORCID = "0000-0003-0423-9679")),
person(given = "Kara",
family = "Davis",
role = c("rth", "own"),
email = "[email protected]"))
Description: Integrate multiple CyTOF datasets collected from independent
sources (i.e. labs, institutions, etc.). Cytofin performs CyTOF panel alignment
across datasets ("homogenization") as well as batch correction using generalized
anchors identified on each CyTOF plate ("normalization").
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Imports:
flowCore,
readxl,
stringr,
tidyr,
reshape2,
ggplot2,
readr,
dplyr
Suggests:
rmarkdown,
knitr,
testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr