adding rstudio devel image

Author: tom-gu

bdverse_binder/CopyOfDockerfile

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+FROM rocker/binder:latest 
+
+MAINTAINER [email protected]
+USER root
+
+
+RUN apt-get update \
+  && apt-get install dialog apt-utils -y --no-install-recommends \
+	libpng-dev \
+	libv8-dev \
+	libgeos-dev \
+	libjq-dev \
+	texmaker \
+	libxml2-dev\
+	libgdal-dev \
+	xdg-utils
+
+
+RUN R -e "options(repos = list(CRAN = 'https://cran.microsoft.com/snapshot/2020-03-15/')); \
+  install.packages('remotes'); \
+  remotes::install_github('bd-R/bdverse'); \
+  remotes::install_github('bd-R/dashboard.demo'); \
+  tinytex::install_tinytex()"

bdverse_rstudio_devel/Dockerfile

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+FROM  rocker/rstudio-daily:devel
+
+MAINTAINER [email protected]
+
+RUN echo "deb http://security.debian.org/debian-security jessie/updates main" >> /etc/apt/sources.list
+
+
+RUN apt-get update -y && apt-get install -y --no-install-recommends \
+	libpng-dev \
+	libv8-dev \
+	libgeos-dev \
+	libjq-dev \
+	texlive \
+	libxml2-dev \
+	libgdal-dev \
+	xdg-utils \
+	libssl1.0.0 \
+	libcurl4-openssl-dev \
+	unixodbc-dev \
+	gdebi-core
+
+RUN R -e "options(repos = list(CRAN = 'https://mran.microsoft.com/snapshot/2020-03-20/')); \
+  install.packages('remotes'); \
+  remotes::install_github('bd-R/bdverse'); \
+  remotes::install_github('bd-R/dashboard.demo')"
+
+ADD bdverse_script.R /home/rstudio/

bdverse_rstudio_devel/bdverse_script.R

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+
+library(bdverse)
+
+bdverse::bdverse_app()
+
+bddwc.app::bddwc_app()
+
+bdchecks.app::bdchecks_app()
+
+bdclean::bdclean_app()
+
+dashboard.demo::run_app()

bdverse_rstudio_devel/shell_commands.sh

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+# Make the image from the directory with the Dockerfile
+docker build -t bdverse-rstudio-devel bdverse_rstudio_devel
+# Log into the Docker Hub from the command line
+docker login --username=tomgu
+# Check the image ID using
+docker images
+# Tag your image
+docker tag ad54bb7c8c5d bdverse-rstudio-devel:2020-03-20
+# Push your image to the repository you created
+docker push bdverse/bdverse-rstudio-devel:2020-03-20
+
+# Delete image
+docker rmi adb10d40ed82
+
+docker rmi -f f86001d8494e
+
+# Pull an image from docker-hub
+docker image pull bdverse/bdverse-rstudio:2020-03-15
+
+# Run the image, but this time attach a volume # Address: http://192.168.99.100:8787/
+docker run --rm -e PASSWORD=t1234 -p 28787:8787 -v //$(pwd)/bdverse_rstudio_devel/data://home/rstudio/data bdverse/bdverse-rstudio-devel:2020-03-20
+
+docker run --rm -e PASSWORD=t1234 -p 3838:3838 -p 8787:8787 -e ADD=shiny -v //$(pwd)/bdverse_rstudio/data://home/rstudio/data bdverse/bdverse-rstudio:2020-03-15
+
+docker run --rm -e PASSWORD=t1234 -p 38787:8787 bdverse/bdverse-rstudio-devel:2020-03-20
+
+
+# Change port
+docker run --rm -e PASSWORD=t1234 -p 28787:8787 -v //$(pwd)/qa_github/data://home/rstudio/data bdverse/bdverse-rstudio:2020-03-15
+
+# Play with docker commands:
+docker image pull bdverse/bdverse-rstudio:2020-03-15
+docker run --rm -e PASSWORD=t1234 -p 8787:8787 bdverse/bdverse-rstudio:2020-03-15
+
+# list docker containers
+docker ps 
+
+# stop the relevant container
+docker stop da3bc94beedd
+
+# Kill all containers
+docker kill $(docker ps -a -q)
+# Delete all containers
+docker rm  $(docker ps -q -a)
+# Show docker disk usage
+docker system df