Release version 1.1.1

Author: sjackman

bin/tigmint-cut

@@ -212,7 +212,7 @@ def ensure_writable(f):
 
 def main():
 	parser = argparse.ArgumentParser(description="Find misassembled regions in assembly using Chromium molecule extents")
-	parser.add_argument("--version", action="version", version="tigmint-cut 1.1.0")
+	parser.add_argument("--version", action="version", version="tigmint-cut 1.1.1")
 	parser.add_argument("fasta", type=str, help="Reference genome fasta file (must have FAI index generated)")
 	parser.add_argument("bed", type=str, help="Sorted bed file of molecule extents")
 	parser.add_argument("-o", "--fastaout", type=str, help="The output FASTA file.", required=True)

bin/tigmint-make

@@ -104,7 +104,7 @@ help:
 	@echo 'For more information see https://bcgsc.github.io/tigmint/'
 
 version:
-	@echo "Tigmint 1.1.0"
+	@echo "Tigmint 1.1.1"
 	@echo "Written by Shaun Jackman @sjackman."
 
 all: tigmint arcs

bin/tigmint-molecule

@@ -234,7 +234,7 @@ class MolecIdentifier:
             "Read a SAM/BAM file and output a TSV file. "
             "The SAM/BAM file must be sorted by BX tag and then by position.")
         parser.add_argument(
-            '--version', action='version', version='tigmint-molecule 1.1.0')
+            '--version', action='version', version='tigmint-molecule 1.1.1')
         parser.add_argument(
             metavar="BAM", dest="in_bam_filename",
             help="Input BAM file sorted by BX tag then position, - for stdin")