Merge pull request #139 from bcgsc/release/v7.3.1

Release/v7.3.1

Author: brayden-bcgsc

.eslintrc.json

@@ -10,6 +10,9 @@
         "plugin:jest/recommended",
         "plugin:jest-formatting/recommended"
     ],
+    "parserOptions": {
+        "ecmaVersion": 2020
+    },
     "rules": {
         "indent": [
             "error",

Dockerfile

@@ -11,5 +11,3 @@ RUN npm ci --only=production
 
 # Bundle app source
 COPY . .
-EXPOSE 8080
-CMD [ "npm", "start" ]

app/routes/graphkb/index.js

@@ -15,10 +15,9 @@ router.use(loginMiddleware);
  * Autocomplete endpoint for interfacing with GraphKB. This endpoint is used by the client
  * for the therapeutic options input forms
  */
-router.post('/:targetType(variant|therapy|evidenceLevel|context)', async (req, res) => {
-  const {body: {keyword}, params: {targetType}, graphkbToken} = req;
+router.get('/:targetType(variant|therapy|evidenceLevel|context)', async (req, res) => {
   try {
-    const data = await graphkbAutocomplete(targetType, graphkbToken, keyword);
+    const data = await graphkbAutocomplete(req.params.targetType, req.graphkbToken, req.query?.search);
     return res.status(HTTP_STATUS.OK).json(data);
   } catch (error) {
     logger.error(error);

package-lock.json

@@ -1,7 +1,7 @@
 {
   "private": true,
   "name": "ipr-api",
-  "version": "7.3.0",
+  "version": "7.3.1",
   "description": "Integrated Pipeline Reports API",
   "main": "bin/server.js",
   "scripts": {

package.json

@@ -13,8 +13,7 @@ const BASE_URL = '/api/graphkb';
 
 const testAutocompleteWithKeyword = async (request, type, keyword) => {
   const {body} = await request
-    .post(`${BASE_URL}/${type}`)
-    .send({keyword})
+    .get(`${BASE_URL}/${type}?search=${keyword}`)
     .auth(username, password)
     .type('json')
     .expect(HTTP_STATUS.OK);
@@ -36,7 +35,7 @@ const testAutocompleteWithKeyword = async (request, type, keyword) => {
 
 const testAutocompleteWithoutKeyword = async (request, type) => {
   const {body} = await request
-    .post(`${BASE_URL}/${type}`)
+    .get(`${BASE_URL}/${type}`)
     .auth(username, password)
     .type('json')
     .expect(HTTP_STATUS.OK);