From 1104d525e241bd7c7108a0a8e9ba32af1dc37d3d Mon Sep 17 00:00:00 2001 From: Lauren Coombe Date: Fri, 20 Nov 2020 09:19:52 -0800 Subject: [PATCH] Release v1.0.5 (#53) --- bin/ntjoin_assemble.py | 4 ++-- ntJoin | 6 +++--- setup.py | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-) diff --git a/bin/ntjoin_assemble.py b/bin/ntjoin_assemble.py index f28a029..4c57fd4 100755 --- a/bin/ntjoin_assemble.py +++ b/bin/ntjoin_assemble.py @@ -1010,7 +1010,7 @@ def parse_arguments(): "increasing/decreasing to assign contig orientation [90]\n " "Note: Only used with --mkt is NOT specified", default=90, type=int) parser.add_argument('-t', help="Number of threads [1]", default=1, type=int) - parser.add_argument("-v", "--version", action='version', version='ntJoin v1.0.4') + parser.add_argument("-v", "--version", action='version', version='ntJoin v1.0.5') parser.add_argument("--agp", help="Output AGP file describing scaffolds", action="store_true") parser.add_argument("--no_cut", help="Do not cut input contigs, place in most representative path", action="store_true") @@ -1040,7 +1040,7 @@ def print_parameters(self): def main(self): "Run ntJoin graph stage" - print("Running ntJoin v1.0.4 ...\n") + print("Running ntJoin v1.0.5 ...\n") self.print_parameters() # Parse the weights of each input reference assembly diff --git a/ntJoin b/ntJoin index 0fd164f..8641e23 100755 --- a/ntJoin +++ b/ntJoin @@ -2,7 +2,7 @@ # ntJoin: Scaffold assemblies using reference assemblies and minimizer graphs # Written by Lauren Coombe @lcoombe -# ntJoin v1.0.4 +# ntJoin v1.0.5 # Input files target=None @@ -92,7 +92,7 @@ endif help: @echo "" @echo "ntJoin: Scaffolding assemblies using reference assemblies and minimizer graphs" - @echo "ntJoin v1.0.4" + @echo "ntJoin v1.0.5" @echo "Usage: ntJoin assemble target= references='List of reference assemblies' reference_weights='List of weights per reference assembly'" @echo "" @echo "Options:" @@ -152,7 +152,7 @@ ifeq ($(ref), None) endif version: - @echo "ntJoin v1.0.4" + @echo "ntJoin v1.0.5" @echo "Written by Lauren Coombe (lcoombe@bcgsc.ca)" .PHONY: help all version analysis assemble check_params jupiter diff --git a/setup.py b/setup.py index e8cd3c1..e469c82 100644 --- a/setup.py +++ b/setup.py @@ -5,7 +5,7 @@ setuptools.setup( name="ntJoin", - version="1.0.4", + version="1.0.5", author="Lauren Coombe", author_email="lcoombe@bcgsc.ca", description="Genome assembly scaffolder using minimizer graphs",