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<title>btllib: seq_writer.cpp</title>
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<div class="headertitle"><div class="title">seq_writer.cpp</div></div>
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<p>An example of writing a gzipped fastq file.</p>
<div class="fragment"><div class="line"><span class="preprocessor">#include "btllib/seq_writer.hpp"</span></div>
<div class="line"> </div>
<div class="line"><span class="preprocessor">#include <iostream></span></div>
<div class="line"> </div>
<div class="line"><span class="keywordtype">int</span></div>
<div class="line">main()</div>
<div class="line">{</div>
<div class="line"> <a id="_a0" name="_a0"></a><a class="code hl_class" href="classbtllib_1_1SeqWriter.html">btllib::SeqWriter</a> writer(<span class="stringliteral">"my_reads.fq.gz"</span>, btllib::SeqWriter::FASTQ);</div>
<div class="line"> writer.<a id="a1" name="a1"></a><a class="code hl_function" href="classbtllib_1_1SeqWriter.html#ad1202d19b9934405fa0cfa7ee165ccc3">write</a>(<span class="stringliteral">"read1"</span>, <span class="stringliteral">"comment1"</span>, <span class="stringliteral">"ACGATCAGCAGCATG"</span>, <span class="stringliteral">"!@$&!#$&@(#*@)%"</span>);</div>
<div class="line"> writer.<a class="code hl_function" href="classbtllib_1_1SeqWriter.html#ad1202d19b9934405fa0cfa7ee165ccc3">write</a>(<span class="stringliteral">"read2"</span>, <span class="stringliteral">"comment2"</span>, <span class="stringliteral">"GTACG"</span>, <span class="stringliteral">"&%(@("</span>);</div>
<div class="line"> <span class="keywordflow">return</span> 0;</div>
<div class="line">}</div>
<div class="ttc" id="aclassbtllib_1_1SeqWriter_html"><div class="ttname"><a href="classbtllib_1_1SeqWriter.html">btllib::SeqWriter</a></div><div class="ttdef"><b>Definition</b> seq_writer.hpp:23</div></div>
<div class="ttc" id="aclassbtllib_1_1SeqWriter_html_ad1202d19b9934405fa0cfa7ee165ccc3"><div class="ttname"><a href="classbtllib_1_1SeqWriter.html#ad1202d19b9934405fa0cfa7ee165ccc3">btllib::SeqWriter::write</a></div><div class="ttdeci">void write(const std::string &id, const std::string &comment, const std::string &seq, const std::string &qual="")</div></div>
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