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classbtllib_1_1Indexlr-members.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<li class="navelem"><a class="el" href="namespacebtllib.html">btllib</a></li><li class="navelem"><a class="el" href="classbtllib_1_1Indexlr.html">Indexlr</a></li> </ul>
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<div class="headertitle"><div class="title">btllib::Indexlr Member List</div></div>
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<p>This is the complete list of members for <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>, including all inherited members.</p>
<table class="directory">
<tr class="even"><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html#a4c28c9cd0832f19fa077a0a4afd1c2f5">begin</a>()</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>close</b>() noexcept (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>end</b>() (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>filter_in</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>filter_out</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>HashedKmer</b> typedef (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html#a16eaf1402422f88cd3a66d03e9e11b85">Indexlr</a>(std::string seqfile, size_t k, size_t w, unsigned flags=0, unsigned threads=5, bool verbose=false, const btllib::BloomFilter &bf1=Indexlr::dummy_bf(), const btllib::BloomFilter &bf2=Indexlr::dummy_bf())</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>Indexlr</b>(std::string seqfile, size_t k, size_t w, size_t q, unsigned flags=0, unsigned threads=5, bool verbose=false, const btllib::BloomFilter &bf1=Indexlr::dummy_bf(), const btllib::BloomFilter &bf2=Indexlr::dummy_bf()) (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>long_mode</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>MAX_SIMULTANEOUS_INDEXLRS</b> (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">static</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>output_bx</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>output_id</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>output_qual</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>output_seq</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr class="even"><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html#a88e89c2c60ff3dea0a151f2fe8cccd00">read</a>()</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="odd"><td class="entry"><b>short_mode</b>() const (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
<tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>~Indexlr</b>() (defined in <a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a>)</td><td class="entry"><a class="el" href="classbtllib_1_1Indexlr.html">btllib::Indexlr</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
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