This is the application specification for service with identifier SubspeciesClassification.
The backend script implementing the application is App-SubspeciesClassification.pl.
The raw JSON file for this specification is SubspeciesClassification.json.
This service performs the following task: Subspecies Classification
It takes the following parameters:
| id | label | type | required | default value |
|---|---|---|---|---|
| input_source | Source of input (id_list, fasta_data, fasta_file, genome_group) | enum | ✔️ | |
| input_fasta_data | Input sequence in fasta formats | string | ||
| input_fasta_file | Input sequence as a workspace file of fasta data | wsid | ||
| input_genome_group | Input sequence as a workspace genome group | wsid | ||
| ref_msa_fasta | Reference multiple sequence alignment (Fasta-formatted) | wsid | ||
| virus_type | Virus type | string | ✔️ | |
| output_path | Output Folder | folder | ✔️ | |
| output_file | File Basename | wsid | ✔️ |