CITATION.cff

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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "EvaluateCore" in publications use:'
type: software
license:
- GPL-2.0-only
- GPL-3.0-only
title: 'EvaluateCore: Quality Evaluation of Core Collections'
version: 0.1.3.9000
identifiers:
- type: doi
  value: 10.32614/CRAN.package.EvaluateCore
- type: url
  value: https://aravind-j.github.io/EvaluateCore/
- type: url
  value: https://doi.org/10.5281/zenodo.3875930
abstract: Implements various quality evaluation statistics to assess the value of
  plant germplasm core collections using qualitative and quantitative phenotypic trait
  data according to Odong et al. (2015) <https://doi.org/10.1007/s00122-012-1971-y>.
authors:
- family-names: Aravind
  given-names: J.
  email: j.aravind@icar.gov.in
  orcid: https://orcid.org/0000-0002-4791-442X
- family-names: Kaur
  given-names: Vikender
  email: vikender.kaur@icar.gov.in
  orcid: https://orcid.org/0000-0001-9698-7329
- family-names: Wankhede
  given-names: Dhammaprakash Pandhari
  email: d.wankhede@icar.gov.in
  orcid: https://orcid.org/0000-0001-6384-8664
- family-names: Nanjundan
  given-names: Joghee
  email: j.nanjundan@icar.gov.in
  orcid: https://orcid.org/0000-0001-6254-7341
preferred-citation:
  type: manual
  title: 'EvaluateCore: Quality Evaluation of Core Collections'
  authors:
  - family-names: Aravind
    given-names: J.
    email: aravindj@nbpgr.ernet.in
    orcid: https://orcid.org/0000-0002-4791-442X
  - family-names: Kaur
    given-names: Vikender
    email: vikender.kaur@icar.gov.in
    orcid: https://orcid.org/0000-0001-9698-7329
  - family-names: Wankhede
    given-names: Dhammaprakash Pandhari
    email: d.wankhede@icar.gov.in
    orcid: https://orcid.org/0000-0001-6384-8664
  - family-names: Nanjundan
    given-names: J.
    email: j.nanjundan@icar.gov.in
  notes: R package version 0.1.3.9000 https://aravind-j.github.io/EvaluateCore/ https://CRAN.R-project.org/package=EvaluateCore
repository: https://CRAN.R-project.org/package=EvaluateCore
repository-code: https://github.com/aravind-j/EvaluateCore
url: https://CRAN.R-project.org/package=EvaluateCore
contact:
- family-names: Aravind
  given-names: J.
  email: j.aravind@icar.gov.in
  orcid: https://orcid.org/0000-0002-4791-442X
keywords:
- core-collections
- core-evaluation
- genebank
- germplasm
- pgr
- plant-genetic-resources
- r
references:
- type: software
  title: 'R: A Language and Environment for Statistical Computing'
  notes: Depends
  url: https://www.R-project.org/
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
  version: '>= 3.5.0'
- type: software
  title: agricolae
  abstract: 'agricolae: Statistical Procedures for Agricultural Research'
  notes: Imports
  repository: https://CRAN.R-project.org/package=agricolae
  authors:
  - family-names: Mendiburu
    given-names: Felipe
    name-particle: de
  year: '2024'
  doi: 10.32614/CRAN.package.agricolae
- type: software
  title: boot
  abstract: 'boot: Bootstrap Functions (Originally by Angelo Canty for S)'
  notes: Imports
  repository: https://CRAN.R-project.org/package=boot
  authors:
  - family-names: Canty
    given-names: Angelo
    email: cantya@mcmaster.ca
  - family-names: Ripley
    given-names: Brian
    email: ripley@stats.ox.ac.uk
  year: '2024'
  doi: 10.32614/CRAN.package.boot
- type: software
  title: car
  abstract: 'car: Companion to Applied Regression'
  notes: Imports
  url: https://CRAN.R-project.org/package=car
  repository: https://CRAN.R-project.org/package=car
  authors:
  - family-names: Fox
    given-names: John
    email: jfox@mcmaster.ca
  - family-names: Weisberg
    given-names: Sanford
    email: sandy@umn.edu
  - family-names: Price
    given-names: Brad
    email: brad.price@mail.wvu.edu
  year: '2024'
  doi: 10.32614/CRAN.package.car
- type: software
  title: cluster
  abstract: 'cluster: "Finding Groups in Data": Cluster Analysis Extended Rousseeuw
    et al.'
  notes: Imports
  url: https://svn.r-project.org/R-packages/trunk/cluster/
  repository: https://CRAN.R-project.org/package=cluster
  authors:
  - family-names: Maechler
    given-names: Martin
    email: maechler@stat.math.ethz.ch
    orcid: https://orcid.org/0000-0002-8685-9910
  - family-names: Rousseeuw
    given-names: Peter
    email: peter.rousseeuw@kuleuven.be
    orcid: https://orcid.org/0000-0002-3807-5353
  - family-names: Struyf
    given-names: Anja
  - family-names: Hubert
    given-names: Mia
    email: Mia.Hubert@uia.ua.ac.be
    orcid: https://orcid.org/0000-0001-6398-4850
  year: '2024'
  doi: 10.32614/CRAN.package.cluster
- type: software
  title: dplyr
  abstract: 'dplyr: A Grammar of Data Manipulation'
  notes: Imports
  url: https://dplyr.tidyverse.org
  repository: https://CRAN.R-project.org/package=dplyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: François
    given-names: Romain
    orcid: https://orcid.org/0000-0002-2444-4226
  - family-names: Henry
    given-names: Lionel
  - family-names: Müller
    given-names: Kirill
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Vaughan
    given-names: Davis
    email: davis@posit.co
    orcid: https://orcid.org/0000-0003-4777-038X
  year: '2024'
  doi: 10.32614/CRAN.package.dplyr
- type: software
  title: entropy
  abstract: 'entropy: Estimation of Entropy, Mutual Information and Related Quantities'
  notes: Imports
  url: https://strimmerlab.github.io/software/entropy/
  repository: https://CRAN.R-project.org/package=entropy
  authors:
  - family-names: Hausser
    given-names: Jean
  - family-names: Strimmer
    given-names: Korbinian
  year: '2024'
  doi: 10.32614/CRAN.package.entropy
- type: software
  title: ggcorrplot
  abstract: 'ggcorrplot: Visualization of a Correlation Matrix using ''ggplot2'''
  notes: Imports
  url: http://www.sthda.com/english/wiki/ggcorrplot-visualization-of-a-correlation-matrix-using-ggplot2
  repository: https://CRAN.R-project.org/package=ggcorrplot
  authors:
  - family-names: Kassambara
    given-names: Alboukadel
    email: alboukadel.kassambara@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.ggcorrplot
- type: software
  title: ggplot2
  abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
  notes: Imports
  url: https://ggplot2.tidyverse.org
  repository: https://CRAN.R-project.org/package=ggplot2
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Chang
    given-names: Winston
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Henry
    given-names: Lionel
  - family-names: Pedersen
    given-names: Thomas Lin
    email: thomas.pedersen@posit.co
    orcid: https://orcid.org/0000-0002-5147-4711
  - family-names: Takahashi
    given-names: Kohske
  - family-names: Wilke
    given-names: Claus
    orcid: https://orcid.org/0000-0002-7470-9261
  - family-names: Woo
    given-names: Kara
    orcid: https://orcid.org/0000-0002-5125-4188
  - family-names: Yutani
    given-names: Hiroaki
    orcid: https://orcid.org/0000-0002-3385-7233
  - family-names: Dunnington
    given-names: Dewey
    orcid: https://orcid.org/0000-0002-9415-4582
  - family-names: Brand
    given-names: Teun
    name-particle: van den
    orcid: https://orcid.org/0000-0002-9335-7468
  year: '2024'
  doi: 10.32614/CRAN.package.ggplot2
- type: software
  title: ggtext
  abstract: 'ggtext: Improved Text Rendering Support for ''ggplot2'''
  notes: Imports
  url: https://wilkelab.org/ggtext/
  repository: https://CRAN.R-project.org/package=ggtext
  authors:
  - family-names: Wilke
    given-names: Claus O.
    email: wilke@austin.utexas.edu
    orcid: https://orcid.org/0000-0002-7470-9261
  - family-names: Wiernik
    given-names: Brenton M.
    email: brenton@wiernik.org
    orcid: https://orcid.org/0000-0001-9560-6336
  year: '2024'
  doi: 10.32614/CRAN.package.ggtext
- type: software
  title: grDevices
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Imports
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
- type: software
  title: gridExtra
  abstract: 'gridExtra: Miscellaneous Functions for "Grid" Graphics'
  notes: Imports
  repository: https://CRAN.R-project.org/package=gridExtra
  authors:
  - family-names: Auguie
    given-names: Baptiste
    email: baptiste.auguie@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.gridExtra
- type: software
  title: kSamples
  abstract: 'kSamples: K-Sample Rank Tests and their Combinations'
  notes: Imports
  repository: https://CRAN.R-project.org/package=kSamples
  authors:
  - family-names: Scholz
    given-names: Fritz
    email: fscholz@u.washington.edu
  - family-names: Zhu
    given-names: Angie
    email: a.zhu.stat@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.kSamples
- type: software
  title: mathjaxr
  abstract: 'mathjaxr: Using ''Mathjax'' in Rd Files'
  notes: Imports
  url: https://github.com/wviechtb/mathjaxr
  repository: https://CRAN.R-project.org/package=mathjaxr
  authors:
  - family-names: Viechtbauer
    given-names: Wolfgang
    email: wvb@wvbauer.com
    orcid: https://orcid.org/0000-0003-3463-4063
  year: '2024'
  doi: 10.32614/CRAN.package.mathjaxr
- type: software
  title: psych
  abstract: 'psych: Procedures for Psychological, Psychometric, and Personality Research'
  notes: Imports
  url: https://personality-project.org/r/psych/
  repository: https://CRAN.R-project.org/package=psych
  authors:
  - family-names: Revelle
    given-names: William
    email: revelle@northwestern.edu
    orcid: https://orcid.org/0000-0003-4880-9610
  year: '2024'
  doi: 10.32614/CRAN.package.psych
- type: software
  title: reshape2
  abstract: 'reshape2: Flexibly Reshape Data: A Reboot of the Reshape Package'
  notes: Imports
  url: https://github.com/hadley/reshape
  repository: https://CRAN.R-project.org/package=reshape2
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: h.wickham@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.reshape2
- type: software
  title: Rdpack
  abstract: 'Rdpack: Update and Manipulate Rd Documentation Objects'
  notes: Imports
  url: https://geobosh.github.io/Rdpack/
  repository: https://CRAN.R-project.org/package=Rdpack
  authors:
  - family-names: Boshnakov
    given-names: Georgi N.
    email: georgi.boshnakov@manchester.ac.uk
  year: '2024'
  doi: 10.32614/CRAN.package.Rdpack
- type: software
  title: stats
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Imports
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
- type: software
  title: tibble
  abstract: 'tibble: Simple Data Frames'
  notes: Imports
  url: https://tibble.tidyverse.org/
  repository: https://CRAN.R-project.org/package=tibble
  authors:
  - family-names: Müller
    given-names: Kirill
    email: kirill@cynkra.com
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  year: '2024'
  doi: 10.32614/CRAN.package.tibble
- type: software
  title: vegan
  abstract: 'vegan: Community Ecology Package'
  notes: Imports
  url: https://github.com/vegandevs/vegan
  repository: https://CRAN.R-project.org/package=vegan
  authors:
  - family-names: Oksanen
    given-names: Jari
    email: jhoksane@gmail.com
  - family-names: Simpson
    given-names: Gavin L.
    email: ucfagls@gmail.com
  - family-names: Blanchet
    given-names: F. Guillaume
  - family-names: Kindt
    given-names: Roeland
  - family-names: Legendre
    given-names: Pierre
  - family-names: Minchin
    given-names: Peter R.
  - family-names: O'Hara
    given-names: R.B.
  - family-names: Solymos
    given-names: Peter
  - family-names: Stevens
    given-names: M. Henry H.
  - family-names: Szoecs
    given-names: Eduard
  - family-names: Wagner
    given-names: Helene
  - family-names: Barbour
    given-names: Matt
  - family-names: Bedward
    given-names: Michael
  - family-names: Bolker
    given-names: Ben
  - family-names: Borcard
    given-names: Daniel
  - family-names: Carvalho
    given-names: Gustavo
  - family-names: Chirico
    given-names: Michael
  - family-names: De Caceres
    given-names: Miquel
  - family-names: Durand
    given-names: Sebastien
  - family-names: Evangelista
    given-names: Heloisa Beatriz Antoniazi
  - family-names: FitzJohn
    given-names: Rich
  - family-names: Friendly
    given-names: Michael
  - family-names: Furneaux
    given-names: Brendan
  - family-names: Hannigan
    given-names: Geoffrey
  - family-names: Hill
    given-names: Mark O.
  - family-names: Lahti
    given-names: Leo
  - family-names: McGlinn
    given-names: Dan
  - family-names: Ouellette
    given-names: Marie-Helene
  - family-names: Ribeiro Cunha
    given-names: Eduardo
  - family-names: Smith
    given-names: Tyler
  - family-names: Stier
    given-names: Adrian
  - family-names: Ter Braak
    given-names: Cajo J.F.
  - family-names: Weedon
    given-names: James
  year: '2024'
  doi: 10.32614/CRAN.package.vegan
- type: software
  title: corehunter
  abstract: 'corehunter: Multi-Purpose Core Subset Selection'
  notes: Suggests
  repository: https://CRAN.R-project.org/package=corehunter
  authors:
  - family-names: De Beukelaer
    given-names: Herman
    email: herman.debeukelaer@gmail.com
  - family-names: Davenport
    given-names: Guy
    email: daveneti@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.corehunter
- type: software
  title: httr
  abstract: 'httr: Tools for Working with URLs and HTTP'
  notes: Suggests
  url: https://httr.r-lib.org/
  repository: https://CRAN.R-project.org/package=httr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2024'
  doi: 10.32614/CRAN.package.httr
- type: software
  title: pander
  abstract: 'pander: An R ''Pandoc'' Writer'
  notes: Suggests
  url: https://rapporter.github.io/pander/
  repository: https://CRAN.R-project.org/package=pander
  authors:
  - family-names: Daróczi
    given-names: Gergely
    email: daroczig@rapporter.net
    orcid: https://orcid.org/0000-0003-3149-8537
  - family-names: Tsegelskyi
    given-names: Roman
    email: roman.tsegelskyi@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.pander
- type: software
  title: RCurl
  abstract: 'RCurl: General Network (HTTP/FTP/...) Client Interface for R'
  notes: Suggests
  repository: https://CRAN.R-project.org/package=RCurl
  authors:
  - family-names: Temple Lang
    given-names: Duncan
    email: duncan@r-project.org
    orcid: https://orcid.org/0000-0003-0159-1546
  year: '2024'
  doi: 10.32614/CRAN.package.RCurl
- type: software
  title: rJava
  abstract: 'rJava: Low-Level R to Java Interface'
  notes: Suggests
  url: http://www.rforge.net/rJava/
  repository: https://CRAN.R-project.org/package=rJava
  authors:
  - family-names: Urbanek
    given-names: Simon
    email: simon.urbanek@r-project.org
  year: '2024'
  doi: 10.32614/CRAN.package.rJava
  version: '>= 0.9-8'
- type: software
  title: XML
  abstract: 'XML: Tools for Parsing and Generating XML Within R and S-Plus'
  notes: Suggests
  url: https://www.omegahat.net/RSXML/
  repository: https://CRAN.R-project.org/package=XML
  authors:
  - family-names: Temple Lang
    given-names: Duncan
    email: duncan@r-project.org
    orcid: https://orcid.org/0000-0003-0159-1546
  year: '2024'
  doi: 10.32614/CRAN.package.XML