Skip to content

Possible memory leak with to_arrow_batch_reader() #2407

@ittus

Description

@ittus

Apache Iceberg version

0.9.1 (latest release)

Please describe the bug 🐞

Summary

It seems that there is memory leak when running to_arrow_batch_reader(), it takes ~30GB memory to read an iceberg table with single 40MB parquet files

Example code:

import boto3
from pyiceberg.table import StaticTable, Table



def iceberg_table_from_metadata_path(metadata_path: str) -> StaticTable:
    session = boto3.Session(region_name="<aws_region>")
    credentials = session.get_credentials()
    credentials = credentials.get_frozen_credentials()
    table = StaticTable.from_metadata(
        metadata_path,
        {
            "client.secret-access-key": credentials.secret_key,
            "client.access-key-id": credentials.access_key,
            "client.session-token": credentials.token,
            "client.region": "<aws_region>",
        },
    )
    return table

def main():
    metadata_path = "<path-to>.metadata.json"
    iceberg_table = iceberg_table_from_metadata_path(metadata_path)
    scan_kwargs = {"row_filter": f"PARTITION='train'"}
    batch_reader = iceberg_table.scan(**scan_kwargs).to_arrow_batch_reader()
    for batch in batch_reader:
        print(f"Inside batch reader")

    plan_files = iceberg_table.scan(**scan_kwargs).plan_files()
    for file in plan_files:
        print(file.file.file_path)

    print("Hello from pyiceberg-test!")

if __name__ == "__main__":
    main()

Running using memray

uv run memray run main.py

Charts

Image Image

Dependencies

  "boto3>=1.40.21",
  "memray>=1.18.0",
  "pyarrow>=21.0.0",
  "pyiceberg==0.10.0rc1",
  "s3fs>=0.4.2"

Willingness to contribute

  • I can contribute a fix for this bug independently
  • I would be willing to contribute a fix for this bug with guidance from the Iceberg community
  • I cannot contribute a fix for this bug at this time

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions