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Fix to run old version
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LuppovDaniil committed Nov 22, 2024
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46 changes: 23 additions & 23 deletions chunks/PMID_39043656.txt
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chunk.id cdr3.alpha v.alpha j.alpha cdr3.beta v.beta d.beta j.beta species mhc.a mhc.b mhc.class antigen.epitope antigen.gene antigen.species reference.id method.identification method.frequency method.singlecell method.sequencing method.verification meta.study.id meta.cell.subset meta.subset.frequency meta.subject.cohort meta.subject.id meta.replica.id meta.clone.id meta.epitope.id meta.tissue meta.donor.MHC meta.donor.MHC.method meta.structure.id comment
1 CALGDSNYQL TRAV6-6 TRAJ33 CAACGAGGAGONTL TRBV13-2 TRBD2 TRBJ2-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
2 CALGDHSGSWQL TRAV6-6 TRAJ22 CASSLRTGANSDY TRBV19 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 20/32 PCR CD4+ x for citrulline
3 CALGDTGNYKY TRAV6-6 TRAJ40 CASSGHNSGNTL TRBV13-3 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
4 CALGDTGNYKY TRAV6-6 TRAJ40 CASSAVNSGNTL TRBV13-3 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 9/32 PCR CD4+ x for citrulline
5 CAAGITGNTGKL TRAV4D-4 TRAJ37 CASSQFRDRGAEQ TRBV5 TRBD1 TRBJ2-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
6 CALGPSGGNYKP TRAV6N-6 TRAJ6 CASSPTSSNERL TRBV2 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 5/63 PCR CD4+ x for citrulline
7 CALNQGGSAKL TRAV6N-6 TRAJ57 CASSQDPSNTGQL TRBV2 TRBD1 TRBJ2-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
8 CALSGANTGKL TRAV6N-6 TRAJ52 CASSQDRSNTEV TRBV2 TRBD1 TRBJ1-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
9 CALRTGGYKV TRAV6N-6 TRAJ12 CASSODSANTEV TRBV2 TRBD1 TRBJ1-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
10 CALGTGGYKV TRAV6N-6 TRAJ12 CASSRDNSNSDY TRBV2 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 10/63 PCR CD4+ x for citrulline
11 CASGTGGYKV TRAV6N-6 TRAJ12 CASSLEQSNSDY TRBV3 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
12 CALRNTNTGKL TRAV6N-6 TRAJ27 CASSPRHSGNTL TRBV4 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
13 CALNGGSNAKL TRAV6N-6 TRAJ42 CASSPQTGGYEQ TRBV4 TRBD2 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
14 CALTGGSNAKL TRAV6N-6 TRAJ42 CASSQGHERL TRBV4 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 5/63 PCR CD4+ x for citrulline
15 CALGSGGNYKP TRAV6N-6 TRAJ6 CASSSQNSGNTL TRBV4 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 3/63 PCR CD4+ x for citrulline
16 CALGTGGYKV TRAV6N-6 TRAJ12 CASSDFSVEQ TRBV13-1 TRBD1 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
17 CAYYGSSGNKL TRAV6N-6 TRAJ32 CASSFRGDNSPL TRBV13-1 TRBD1 TRBJ1-6 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
18 CALSDGGQKL TRAV6N-6 TRAJ16 CASGDFRAEQ TRBV13-2 TRBD1 TRBJ2-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
19 CALGGGSALGRL TRAV6-6 TRAJ18 CASSRGGTANTGOL TRBV17 TRBD1 TRBJ2-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 14/63 PCR CD4+ x for citrulline
20 CALSVPNNAGAKL TRAV12N-3 TRAJ39 CASSLGQGSSYEQ TRBV26 TRBD1 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
21 CALRGSGGNYKP TRAV6N-6 TRAJ6 CAWSLGTGQDTO TRBV31 TRBD1 TRBJ2-5 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
22 CALSGGNYKP TRAV6N-6 TRAJ6 CAWSLGQGGNERL TRBV31 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 15/63 PCR CD4+ x for citrulline
chunk.id cdr3.alpha v.alpha j.alpha cdr3.beta v.beta d.beta j.beta species mhc.a mhc.b mhc.class antigen.epitope antigen.gene antigen.species reference.id method.identification method.frequency method.singlecell method.sequencing method.verification meta.study.id meta.cell.subset meta.subset.frequency meta.subject.cohort meta.subject.id meta.replica.id meta.clone.id meta.epitope.id meta.tissue meta.donor.MHC meta.donor.MHC.method meta.structure.id comment
1 CALGDSNYQL TRAV6-6 TRAJ33 CAACGAGGAGQNTL TRBV13-2 TRBD2 TRBJ2-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
2 CALGDHSGSWQL TRAV6-6 TRAJ22 CASSLRTGANSDY TRBV19 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 20/32 PCR CD4+ x for citrulline
3 CALGDTGNYKY TRAV6-6 TRAJ40 CASSGHNSGNTL TRBV13-3 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
4 CALGDTGNYKY TRAV6-6 TRAJ40 CASSAVNSGNTL TRBV13-3 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 9/32 PCR CD4+ x for citrulline
5 CAAGITGNTGKL TRAV4D-4 TRAJ37 CASSQFRDRGAEQ TRBV5 TRBD1 TRBJ2-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII GVYATXSSAVRLR VIM HomoSapiens PMID:39043656 tetramer-sort 1/32 PCR CD4+ x for citrulline
6 CALGPSGGNYKP TRAV6N-6 TRAJ6 CASSPTSSNERL TRBV2 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 5/63 PCR CD4+ x for citrulline
7 CALNQGGSAKL TRAV6N-6 TRAJ57 CASSQDPSNTGQL TRBV2 TRBD1 TRBJ2-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
8 CALSGANTGKL TRAV6N-6 TRAJ52 CASSQDRSNTEV TRBV2 TRBD1 TRBJ1-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
9 CALRTGGYKV TRAV6N-6 TRAJ12 CASSQDSANTEV TRBV2 TRBD1 TRBJ1-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
10 CALGTGGYKV TRAV6N-6 TRAJ12 CASSRDNSNSDY TRBV2 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 10/63 PCR CD4+ x for citrulline
11 CASGTGGYKV TRAV6N-6 TRAJ12 CASSLEQSNSDY TRBV3 TRBD1 TRBJ1-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
12 CALRNTNTGKL TRAV6N-6 TRAJ27 CASSPRHSGNTL TRBV4 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
13 CALNGGSNAKL TRAV6N-6 TRAJ42 CASSPQTGGYEQ TRBV4 TRBD2 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
14 CALTGGSNAKL TRAV6N-6 TRAJ42 CASSQGHERL TRBV4 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 5/63 PCR CD4+ x for citrulline
15 CALGSGGNYKP TRAV6N-6 TRAJ6 CASSSQNSGNTL TRBV4 TRBD1 TRBJ1-3 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 3/63 PCR CD4+ x for citrulline
16 CALGTGGYKV TRAV6N-6 TRAJ12 CASSDFSVEQ TRBV13-1 TRBD1 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
17 CAYYGSSGNKL TRAV6N-6 TRAJ32 CASSFRGDNSPL TRBV13-1 TRBD1 TRBJ1-6 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
18 CALSDGGQKL TRAV6N-6 TRAJ16 CASGDFRAEQ TRBV13-2 TRBD1 TRBJ2-1 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
19 CALGGGSALGRL TRAV6-6 TRAJ18 CASSRGGTANTGQL TRBV17 TRBD1 TRBJ2-2 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 14/63 PCR CD4+ x for citrulline
20 CALSVPNNAGAKL TRAV12N-3 TRAJ39 CASSLGQGSSYEQ TRBV26 TRBD1 TRBJ2-7 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
21 CALRGSGGNYKP TRAV6N-6 TRAJ6 CAWSLGTGQDTQ TRBV31 TRBD1 TRBJ2-5 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 1/63 PCR CD4+ x for citrulline
22 CALSGGNYKP TRAV6N-6 TRAJ6 CAWSLGQGGNERL TRBV31 TRBD1 TRBJ1-4 MusMusculus HLA-DRA*01:01 HLA-DRB1*04:01 MHCII EIFDSXGNPTVEV ENO1 HomoSapiens PMID:39043656 tetramer-sort 15/63 PCR CD4+ x for citrulline
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