Merge branch 'master' into fix_download_pvolfiles

Author: adokter

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: bioRad
 Title: Biological Analysis and Visualization of Weather Radar Data
-Version: 0.9.0.9000
+Version: 0.9.1.9000
 Description: Extract, visualize and summarize aerial movements of birds and
     insects from weather radar data. See Dokter, A. M. et al. (2018) 
     "bioRad: biological analysis and visualization of weather radar data" <doi:10.1111/ecog.04028>
@@ -26,7 +26,7 @@ URL: https://github.com/adokter/bioRad/, https://adriaandokter.com/bioRad/
 BugReports: https://github.com/adokter/bioRad/issues
 biocViews:
 Depends:
-    R (>= 3.5.0)
+    R (>= 4.0.0)
 Imports:
     assertthat,
     curl,

NEWS.md

@@ -1,7 +1,11 @@
-# bioRad 0.9.0.9000
+# bioRad 0.9.1.9000
 
 * new argument `directory_tree` in function `download_pvolfiles()` for ommitting local directory tree (#710).
 
+# bioRad 0.9.1
+
+* new argument `cachedir` in `map()` to set the location of the cache used by dependency package `ggspatial` (#708)
+
 # bioRad 0.9.0
 ## new features
 

R/map.R

@@ -21,6 +21,8 @@
 #' @param palette Character vector. Hexadecimal color values defining the plot
 #'   color scale, e.g. output from [viridisLite::viridis()].
 #' @param zoomin Numeric. Maps to [ggspatial::annotation_map_tile()]
+#' @param cachedir Character. Maps to [ggspatial::annotation_map_tile()], defaults to
+#' `tools::R_user_dir("bioRad")`
 #' @param ... Arguments passed to [ggplot2::ggplot()].
 #' @importFrom methods as
 #' @return A ggplot object
@@ -82,7 +84,7 @@ map <- function(x, ...) {
 #' @export
 map.ppi <- function(x, map="cartolight", param, alpha = 0.7, xlim, ylim, zlim = c(-20, 20),
                     ratio, radar_size = 3, radar_color = "#202020", n_color = 1000,
-                    palette = NA, zoomin = -2, ...) {
+                    palette = NA, zoomin = -2, cachedir = tools::R_user_dir("bioRad"), ...) {
 
   stopifnot(inherits(x, "ppi"))
 
@@ -249,7 +251,7 @@ map.ppi <- function(x, map="cartolight", param, alpha = 0.7, xlim, ylim, zlim =
 
   mymap <-
     ggplot2::ggplot() +
-    ggspatial::annotation_map_tile(type = map, zoomin = zoomin, cachedir=system.file("rosm.cache", package = "ggspatial")) +
+    ggspatial::annotation_map_tile(type = map, zoomin = zoomin, cachedir = cachedir) +
     ggplot2::coord_sf(xlim = projected_xlim, ylim = projected_ylim, expand=FALSE) +
     ggplot2::geom_raster(data = rdf, ggplot2::aes(x = x, y = y, fill = fill), na.rm = TRUE, interpolate = FALSE) +
     ggplot2::scale_fill_identity(na.value = "transparent") +

README.md

@@ -102,7 +102,7 @@ Then load the package with:
 
 ``` r
 library(bioRad)
-#> Welcome to bioRad version 0.9.0
+#> Welcome to bioRad version 0.9.1
 #> using vol2birdR version 1.0.9 (MistNet installed)
 ```
 

codemeta.json

@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/adokter/bioRad/",
   "issueTracker": "https://github.com/adokter/bioRad/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "0.9.0",
+  "version": "0.9.1",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -247,7 +247,7 @@
       "@type": "SoftwareApplication",
       "identifier": "R",
       "name": "R",
-      "version": ">= 3.5.0"
+      "version": ">= 4.0.0"
     },
     "2": {
       "@type": "SoftwareApplication",
@@ -524,7 +524,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "4943.786KB",
+  "fileSize": "4943.736KB",
   "citation": [
     {
       "@type": "ScholarlyArticle",

cran-comments.md

@@ -1,5 +1,2 @@
-## bioRad 0.9.0 
-various bugfixes and introduction of three new functions:
-* `as.vp()` to convert data.frame to vertical profile object
-* `clean_mixture(`) for partitioning bird and insect mixtures
-* `filter_precip()` for posthoc rain filtering
+## bioRad 0.9.1 
+make location of the cache used by package dependency ggspatial complient with CRAN policies.