Gene prediction failed during run

[keenhl]

Hi all,

I tried to do gene prediction with Quast, but the process failed due to error.

Quast was ran with the following gene prediction options: --eukaryote --gene-finding

The error message from contigs_genemark_stderr:

error, file not found /Users/keenhl/Desktop/q/quast-5.0.2/quast_libs/genemark-es/macosx/gmes_petap.pl: output/gmhmm/dna.fa_415.out

Multiple warnings in contigs_genemark_stderr of the following type:

warning on: /Users/keenhl/Desktop/q/quast-5.0.2/quast_libs/genemark-es/macosx/gmhmme3 -m /Users/keenhl/Desktop/q/quast-5.0.2/quast_results/results_2020_01_27_16_57_16/predicted_genes/tmpcontigs/output/gmhmm.mod -f lst -n -o output/gmhmm/dna.fa_415.out /Users/keenhl/Desktop/q/quast-5.0.2/quast_results/results_2020_01_27_16_57_16/predicted_genes/tmpcontigs/output/data/dna.fa_415

Any thoughts. Also, I ran it more than once and got the same error.

Thanks for your help.