debug

Zilong-Li · Zilong-Li · commit 3300f9ee2e82 · 2024-03-21T12:37:30.000+01:00
diff --git a/src/vcfpp.h b/src/vcfpp.h
@@ -1582,6 +1582,7 @@ class BcfWriter
         str.push_back('\0'); // don't forget string has no \0;
         kstring_t s = {vcfline.length(), vcfline.length(), &str[0]}; // kstring
         ret = vcf_parse(&s, header.hdr, b.get());
+        std::cout << ret << ", ret\n";
         if(ret > 0) throw std::runtime_error("error parsing: " + vcfline + "\n");
         if(b->errcode == BCF_ERR_CTG_UNDEF)
         {

Original file line number	Diff line number	Diff line change
`@@ -1582,6 +1582,7 @@ class BcfWriter`
`1582`	`1582`	`str.push_back('\0'); // don't forget string has no \0;`
`1583`	`1583`	`kstring_t s = {vcfline.length(), vcfline.length(), &str[0]}; // kstring`
`1584`	`1584`	`ret = vcf_parse(&s, header.hdr, b.get());`
	`1585`	`+ std::cout << ret << ", ret\n";`
`1585`	`1586`	`if(ret > 0) throw std::runtime_error("error parsing: " + vcfline + "\n");`
`1586`	`1587`	`if(b->errcode == BCF_ERR_CTG_UNDEF)`
`1587`	`1588`	`{`