Add CI

.github/pre-commit.yml

@@ -0,0 +1,21 @@
+name: "Lint"
+
+on:
+  push:
+  pull_request:
+
+env:
+  FORCE_COLOR: 1
+
+jobs:
+  pre-commit:
+    env:
+      SKIP: 'no-commit-to-branch'
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v4
+
+      - name: Run pre-commit
+        uses: pre-commit/[email protected]

.github/pytest.yml

@@ -0,0 +1,38 @@
+---
+name: pytest
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+
+env:
+  FORCE_COLOR: 1
+
+jobs:
+  test:
+    name: PYTESTS (${{ matrix.python-version }}, ${{ matrix.os }})
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: true
+      matrix:
+        os: ["ubuntu-22.04"]
+        python-version: ["3.10"]
+
+    steps:
+    - name: Checkout
+    - uses: actions/checkout@v4
+
+    - name: Basic install
+      run: pip install -r requirements.txt
+
+    - name: Run Tests
+      run: pytest --cov 
+
+    - name: Upload coverage reports to Codecov
+      uses: codecov/codecov-action@v4
+      with:
+          flags: python-${{ matrix.python-version }}
+          token: ${{ secrets.CODECOV_TOKEN }}
+

.pre-commit-config.py

@@ -0,0 +1,22 @@
+default_language_version:
+    # all hooks should run with python 3.6+
+    python: python3
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.5.0
+    hooks:
+      - id: no-commit-to-branch
+      - id: check-executables-have-shebangs
+      - id: check-shebang-scripts-are-executable
+      - id: check-added-large-files
+        args: ['--maxkb=500', '--enforce-all']
+      - id: check-yaml
+      - id: check-toml
+
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    # Ruff version.
+    rev: v0.2.1
+    hooks:
+#      - id: ruff
+#        args: [--show-source, --fix]
+#      - id: ruff-format

requirements.txt

@@ -3,6 +3,7 @@ h5py~=3.11
 matplotlib~=3.9
 bokeh==2.4.3
 astropy~=6.0
+pre-commit
 h5netcdf~=1.3
 pytensor~=2.23
 tomli >= 2.0.0 ; python_version < "3.11"