{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":703445100,"defaultBranch":"main","name":"BioT5","ownerLogin":"QizhiPei","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-10-11T09:00:33.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/55624066?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1709183409.0","currentOid":""},"activityList":{"items":[{"before":"b98e64afc7a0fa43271444a845e252042f60e927","after":"94c8fffb496a37be943ff4263c8308896ad6b848","ref":"refs/heads/main","pushedAt":"2024-06-01T14:19:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeterswu","name":"Lijun Wu","path":"/apeterswu","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3659280?s=80&v=4"},"commit":{"message":"Update BioT5 citation","shortMessageHtmlLink":"Update BioT5 citation"}},{"before":"fc352975c9a78d64a8ebf1a0379525337493d367","after":"b98e64afc7a0fa43271444a845e252042f60e927","ref":"refs/heads/main","pushedAt":"2024-05-28T07:55:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update email","shortMessageHtmlLink":"Update email"}},{"before":"b83ee54453e006cfda6f684bdc16585588e71d3e","after":"fc352975c9a78d64a8ebf1a0379525337493d367","ref":"refs/heads/main","pushedAt":"2024-05-23T10:17:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"1c0a92b8ba7fd743b277aa78bc7ee47004786fb4","after":"b83ee54453e006cfda6f684bdc16585588e71d3e","ref":"refs/heads/main","pushedAt":"2024-04-18T17:20:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md with BioT5+ citation info","shortMessageHtmlLink":"Update README.md with BioT5+ citation info"}},{"before":"1d4fe5d207cbc9a8dffbf71d7e3774bed4acd0d4","after":"1c0a92b8ba7fd743b277aa78bc7ee47004786fb4","ref":"refs/heads/main","pushedAt":"2024-03-07T12:41:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"a4bc6ff38856d058895ae9ca4ed5c31ec12c0548","after":"1d4fe5d207cbc9a8dffbf71d7e3774bed4acd0d4","ref":"refs/heads/main","pushedAt":"2024-03-03T08:00:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fe887660192889387157c85e40fc3b366b3ced97","after":"a4bc6ff38856d058895ae9ca4ed5c31ec12c0548","ref":"refs/heads/main","pushedAt":"2024-03-02T14:56:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeterswu","name":"Lijun Wu","path":"/apeterswu","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3659280?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"5f38fe0379e9725032742506b95bf3bbe876e6cb","after":"fe887660192889387157c85e40fc3b366b3ced97","ref":"refs/heads/main","pushedAt":"2024-03-02T14:54:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeterswu","name":"Lijun Wu","path":"/apeterswu","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3659280?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"7354981b64315ee1ddd2f6a04b35e9e67ed8725e","after":"5f38fe0379e9725032742506b95bf3bbe876e6cb","ref":"refs/heads/main","pushedAt":"2024-02-29T05:13:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"9e804ecfe3ee03acbdef374c30e1741825cf2945","after":"7354981b64315ee1ddd2f6a04b35e9e67ed8725e","ref":"refs/heads/main","pushedAt":"2024-02-29T05:13:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"a0c58073a823798c48c1d9cb7ad41e97ba71827c","after":"9e804ecfe3ee03acbdef374c30e1741825cf2945","ref":"refs/heads/main","pushedAt":"2024-02-29T05:10:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Add files via upload","shortMessageHtmlLink":"Add files via upload"}},{"before":"35ac804a5299711e12e32a90f349cdbfc8b26ab6","after":"a0c58073a823798c48c1d9cb7ad41e97ba71827c","ref":"refs/heads/main","pushedAt":"2024-02-29T05:09:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Rename pipeline.png to overview_biot5.png","shortMessageHtmlLink":"Rename pipeline.png to overview_biot5.png"}},{"before":"7c85cfe67224baa9782ac3a149eab5235eccc746","after":"35ac804a5299711e12e32a90f349cdbfc8b26ab6","ref":"refs/heads/main","pushedAt":"2024-02-29T05:07:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md for BioT5+","shortMessageHtmlLink":"Update README.md for BioT5+"}},{"before":"b91bce46d81d23b2e01125d7c7999b954fb29e42","after":"7c85cfe67224baa9782ac3a149eab5235eccc746","ref":"refs/heads/main","pushedAt":"2024-02-26T17:24:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"e088e6d3ab6f17487af6188cee7d4e68344c8b3c","after":"b91bce46d81d23b2e01125d7c7999b954fb29e42","ref":"refs/heads/main","pushedAt":"2024-02-22T14:43:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeterswu","name":"Lijun Wu","path":"/apeterswu","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3659280?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"168b42a02952a08172b671203f492c3b9628803e","after":"e088e6d3ab6f17487af6188cee7d4e68344c8b3c","ref":"refs/heads/main","pushedAt":"2023-12-20T11:41:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update train_utils.py for DDP pad_token_id error","shortMessageHtmlLink":"Update train_utils.py for DDP pad_token_id error"}},{"before":"d75150e475fae31a14b74f4d2602da4d6eda6857","after":"168b42a02952a08172b671203f492c3b9628803e","ref":"refs/heads/main","pushedAt":"2023-12-18T09:51:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update train_utils.py, debug for attention_mask problem in pre-training","shortMessageHtmlLink":"Update train_utils.py, debug for attention_mask problem in pre-training"}},{"before":"002b0466f23ad6b1939c4412fd469706fc91abaf","after":"d75150e475fae31a14b74f4d2602da4d6eda6857","ref":"refs/heads/main","pushedAt":"2023-11-20T13:38:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"debug for custom_utils.py","shortMessageHtmlLink":"debug for custom_utils.py"}},{"before":"dea329d4393cafe4d0f7b2e8c4ddfe81fe8cec3a","after":"002b0466f23ad6b1939c4412fd469706fc91abaf","ref":"refs/heads/main","pushedAt":"2023-11-14T03:52:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"bc8012c9b5ef3a2eda0c2efdebfb12b01961e110","after":"dea329d4393cafe4d0f7b2e8c4ddfe81fe8cec3a","ref":"refs/heads/main","pushedAt":"2023-11-09T13:31:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"5970c6e6a2f7bbf280d5ca11fd5b484d3371faf6","after":"bc8012c9b5ef3a2eda0c2efdebfb12b01961e110","ref":"refs/heads/main","pushedAt":"2023-11-09T13:30:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"06ccea75642915c482bf1785115024559576ac19","after":"5970c6e6a2f7bbf280d5ca11fd5b484d3371faf6","ref":"refs/heads/main","pushedAt":"2023-11-06T12:17:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"add readme","shortMessageHtmlLink":"add readme"}},{"before":"f3f2432c9e009a56cf83f294554e0526d4ea879b","after":"06ccea75642915c482bf1785115024559576ac19","ref":"refs/heads/main","pushedAt":"2023-11-06T12:05:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"add data submodule","shortMessageHtmlLink":"add data submodule"}},{"before":"a8f70d9154388c4af8af8188da3f5b83e3133aaf","after":"f3f2432c9e009a56cf83f294554e0526d4ea879b","ref":"refs/heads/main","pushedAt":"2023-11-06T12:04:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"delete data","shortMessageHtmlLink":"delete data"}},{"before":"a6d03c20c53321c23bf73bb0fc6d31bc9b755b45","after":"a8f70d9154388c4af8af8188da3f5b83e3133aaf","ref":"refs/heads/main","pushedAt":"2023-11-06T11:53:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"add data","shortMessageHtmlLink":"add data"}},{"before":"e8a12965bcf068c1a956eacea1a1785f45722577","after":"a6d03c20c53321c23bf73bb0fc6d31bc9b755b45","ref":"refs/heads/main","pushedAt":"2023-11-06T11:41:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"remove splits","shortMessageHtmlLink":"remove splits"}},{"before":"f63c743e2316916c43e424c4492428f35663bf9a","after":"e8a12965bcf068c1a956eacea1a1785f45722577","ref":"refs/heads/main","pushedAt":"2023-11-06T10:38:45.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"modify data","shortMessageHtmlLink":"modify data"}},{"before":"674f32733a9439dfa231865a9aebd43120bb1f23","after":"f63c743e2316916c43e424c4492428f35663bf9a","ref":"refs/heads/main","pushedAt":"2023-11-06T10:14:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"modify data","shortMessageHtmlLink":"modify data"}},{"before":"286c10c55c340231ccd2f73a38d0a1b9a16a10ca","after":"674f32733a9439dfa231865a9aebd43120bb1f23","ref":"refs/heads/main","pushedAt":"2023-11-06T10:12:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"modify data; update readme","shortMessageHtmlLink":"modify data; update readme"}},{"before":"4b2cd6ff2b1d76d1905224fc61a42a233cb5ea3d","after":"286c10c55c340231ccd2f73a38d0a1b9a16a10ca","ref":"refs/heads/main","pushedAt":"2023-11-06T08:05:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"QizhiPei","name":"Qizhi Pei","path":"/QizhiPei","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55624066?s=80&v=4"},"commit":{"message":"update readme","shortMessageHtmlLink":"update readme"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEWcHxmgA","startCursor":null,"endCursor":null}},"title":"Activity ยท QizhiPei/BioT5"}