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Evaluation suite - output #36

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csudre opened this issue Aug 11, 2020 · 1 comment
Open

Evaluation suite - output #36

csudre opened this issue Aug 11, 2020 · 1 comment

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@csudre
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csudre commented Aug 11, 2020

Context
Following the evaluation process on a set of references / output pairs, an aggregated report should be produced

Describe the solution you'd like
2 separate aggregations should be proposed:

  • Raw aggregation - All the calculated metrics for each reference/output pair should be made available
  • Population aggregation - Core statistics of the metrics over the population of reference/output pair should be produced including
    • central tendency and variation
    • indication of range
    • indication of cases at 5, 25, 50, 75, 95 percentile of performance for each metric
  • The reports should be made available as pandas data frame with the option to save in a specified format (csv, xlsx, html)

Additional context
https://github.com/Project-MONAI/MONAI/wiki/Evaluation-metrics-task-force
@jenspetersen
@danieltudosiu
@AReinke

@Nic-Ma
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Nic-Ma commented Jan 9, 2021

For the first step, I will try to implement a summary report tool based on ignite handler.

Thanks.

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