Change packaging to use hatch-vcs and pyproject.toml (#897)

Author: tsalo

.circleci/config.yml

@@ -316,13 +316,7 @@ jobs:
           no_output_timeout: 3h
           command: |
             # Get version, update files.
-            THISVERSION=$( python3 get_version.py )
-            if [[ ${THISVERSION:0:1} == "0" ]] ; then
-              echo "WARNING: latest git tag could not be found"
-              echo "Please, make sure you fetch all tags from upstream with"
-              echo "the command ``git fetch --tags --verbose`` and push"
-              echo "them to your fork with ``git push origin --tags``"
-            fi
+            THISVERSION=$(python -c "from aslprep import __version__; print(__version__)")
             sed -i "s/title = {xcp_d}/title = {xcp_d ${CIRCLE_TAG:-$THISVERSION}}/" xcp_d/data/boilerplate.bib
             # Build docker image
             e=1 && for i in {1..5}; do

.codespellrc

@@ -0,0 +1,6 @@
+[codespell]
+skip = .git,*.pdf,*.svg,*.html,dataset_description.json
+# te - TE
+# Weill - name
+# reson - Reson. abbreviation in citation
+ignore-words-list = te,weill,reson

.git_archival.txt

@@ -0,0 +1,4 @@
+node: $Format:%H$
+node-date: $Format:%cI$
+describe-name: $Format:%(describe:tags=true,match=*[0-9]*)$
+ref-names: $Format:%D$

.gitattributes

@@ -0,0 +1 @@
+.git_archival.txt  export-subst

.github/workflows/lint.yml

@@ -31,7 +31,7 @@ jobs:
       - name: Install flake8 and related packages
         run: python -m pip install \
           flake8 flake8-absolute-import flake8-black flake8-docstrings \
-          flake8-isort flake8-unused-arguments flake8-use-fstring \
-          flake8-warnings pep8-naming
+          flake8-isort flake8-pyproject flake8-unused-arguments \
+          flake8-use-fstring flake8-warnings pep8-naming
       - name: Check xcp_d
         run: python -m flake8 xcp_d

.gitignore

@@ -4,6 +4,9 @@ xcp_d/tests/test_data
 xcp_d/tests/data/test_data
 .circleci/local_xcpd_path.txt
 
+# setuptools-scm
+xcp_d/_version.py
+
 # documentation
 docs/api/
 docs/generated/

.pre-commit-config.yaml

@@ -0,0 +1,16 @@
+repos:
+-   repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.4.0
+    hooks:
+    -   id: trailing-whitespace
+    -   id: end-of-file-fixer
+    -   id: check-yaml
+    -   id: check-added-large-files
+-   repo: https://github.com/psf/black
+    rev: 23.1.0
+    hooks:
+    -   id: black
+-   repo: https://github.com/pycqa/isort
+    rev: 5.12.0
+    hooks:
+    -   id: isort

.versions.json

@@ -0,0 +1,23 @@
+{
+	"flagged": {
+		"0.0.1": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.2": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.3": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.4": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.5": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.6": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.7": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.8": "Denoised BOLD data contained interpolated volumes.",
+		"0.0.9": "Denoised BOLD data contained interpolated volumes.",
+		"0.1.0": "Denoised BOLD data contained interpolated volumes.",
+		"0.1.1": "Denoised BOLD data contained interpolated volumes.",
+		"0.1.2": "Denoised BOLD data contained interpolated volumes.",
+		"0.1.3": "Denoised BOLD data contained interpolated volumes.",
+		"0.2.0": "Denoised BOLD data contained interpolated volumes.",
+		"0.2.1": "Denoised BOLD data contained interpolated volumes.",
+		"0.2.2": "Denoised BOLD data contained interpolated volumes.",
+		"0.3.0": "Denoised BOLD data contained interpolated volumes.",
+		"0.3.1": "Denoised BOLD data contained interpolated volumes.",
+		"0.3.2": "Denoised BOLD data contained interpolated volumes."
+	}
+}