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Adapt match_variants to allow VCF files as input #2

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smlmbrt opened this issue Aug 8, 2022 · 0 comments

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smlmbrt commented Aug 8, 2022 •

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Would be useful to be able to match_variants against a set of VCF files. Would require edits to:

pgscatalog_utils/pgscatalog_utils/match/read.py

Line 10 in a6de70c

def read_target(path: str, n_threads: int, remove_multiallelic: bool) -> pl.DataFrame:
pgscatalog_utils/pgscatalog_utils/match/read.py

Line 42 in a6de70c

def _detect_target_format(path: str) -> Target:

smlmbrt added the enhancement label

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