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Hard coded kmer limit for collections #24

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sstrong99 opened this issue Nov 20, 2023 · 0 comments

sstrong99 commented Nov 20, 2023

It looks like fastv is imposing a minimum of 11 kmer sequences for an entry in a kmer collection file: https://github.com/OpenGene/fastv/blob/master/src/kmercollection.cpp#L112

I can't find this documented anywhere. Am I missing it, or misunderstanding this code? What's the reasoning behind this hardcoded limit?

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