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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>uk.ac.ebi.ddi</groupId>
<artifactId>ddi-omicsDI</artifactId>
<packaging>pom</packaging>
<version>1.4.1-SNAPSHOT</version>
<modules>
<module>ddi-index-pipeline</module>
<module>ddi-commons</module>
<module>ddi-dataset-clients</module>
<module>ddi-integration</module>
<module>ddi-ebi-logs</module>
<module>ddi-web</module>
</modules>
<properties>
<maven.compiler.source>17</maven.compiler.source>
<maven.compiler.target>17</maven.compiler.target>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<spring.data.mongo.version>3.0.3.RELEASE</spring.data.mongo.version>
<spring.version>6.0.8</spring.version>
<junit.version>4.12</junit.version>
<commons-net.version>3.6</commons-net.version>
<mockito.version>1.9.5</mockito.version>
<woodstox.version>4.4.1</woodstox.version>
<fastutil.version>6.5.1</fastutil.version>
<common.cli.version>1.2</common.cli.version>
<java.version>17</java.version>
<spring.boot.version>3.0.4</spring.boot.version>
</properties>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit.version}</version>
</dependency>
<!-- Spring test -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-test</artifactId>
<version>${spring.version}</version>
<scope>test</scope>
</dependency>
<!-- Spring Core -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-core</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-tx</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-context-support</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-mongodb</artifactId>
<version>${spring.boot.version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-web</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.retry</groupId>
<artifactId>spring-retry</artifactId>
<version>2.0.1</version>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
<version>2.12.3</version>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>2.12.3</version>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
<version>2.12.3</version>
</dependency>
<dependency>
<groupId>commons-net</groupId>
<artifactId>commons-net</artifactId>
<version>${commons-net.version}</version>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>${mockito.version}</version>
</dependency>
<!-- https://mvnrepository.com/artifact/jakarta.xml.bind/jakarta.xml.bind-api -->
<dependency>
<groupId>jakarta.xml.bind</groupId>
<artifactId>jakarta.xml.bind-api</artifactId>
<version>4.0.0</version>
</dependency>
<dependency>
<groupId>commons-cli</groupId>
<artifactId>commons-cli</artifactId>
<version>${common.cli.version}</version>
</dependency>
<dependency>
<groupId>com.github.marschall</groupId>
<artifactId>spring-batch-inmemory</artifactId>
<version>2.0.0</version>
</dependency>
<!--<dependency>
<groupId>org.mongodb</groupId>
<artifactId>mongodb-driver-sync</artifactId>
<version>4.0.5</version>
</dependency>-->
<!--<dependency>
<groupId>org.mongodb</groupId>
<artifactId>mongodb-driver-sync</artifactId>
<version>4.2.3</version>
</dependency>
<!– https://mvnrepository.com/artifact/org.mongodb/mongodb-driver-core –>
<dependency>
<groupId>org.mongodb</groupId>
<artifactId>mongodb-driver-core</artifactId>
<version>4.2.3</version>
</dependency>
<!– https://mvnrepository.com/artifact/org.mongodb/bson –>
<dependency>
<groupId>org.mongodb</groupId>
<artifactId>bson</artifactId>
<version>4.2.3</version>
</dependency>-->
<dependency>
<groupId>org.apache.httpcomponents.client5</groupId>
<artifactId>httpclient5</artifactId>
<version>5.2.1</version>
<exclusions>
<exclusion>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>jakarta.mail</groupId>
<artifactId>jakarta.mail-api</artifactId>
<version>2.1.1</version>
</dependency>
<dependency>
<groupId>javax.xml.bind</groupId>
<artifactId>jaxb-api</artifactId>
<version>2.3.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.activation/activation -->
<dependency>
<groupId>javax.activation</groupId>
<artifactId>activation</artifactId>
<version>1.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jaxb/jaxb-runtime -->
<dependency>
<groupId>org.glassfish.jaxb</groupId>
<artifactId>jaxb-runtime</artifactId>
<version>4.0.0</version>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-lang3</artifactId>
<version>3.12.0</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-context</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-log4j2</artifactId>
<version>${spring.boot.version}</version>
</dependency>
<dependency>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
<version>1.4.7</version>
<scope>test</scope>
</dependency>
<!--<dependency>
<groupId>org.mongodb</groupId>
<artifactId>mongodb-driver-sync</artifactId>
<version>4.2.3</version>
</dependency>
<dependency>
<groupId>org.mongodb</groupId>
<artifactId>mongo-java-driver</artifactId>
<version>3.12.13</version>
</dependency>-->
</dependencies>
<build>
<plugins>
<plugin>
<artifactId>maven-release-plugin</artifactId>
<version>2.5.3</version>
<configuration>
<autoVersionSubmodules>true</autoVersionSubmodules>
<releaseProfiles>skipTestsForReleasePerform</releaseProfiles>
<goals>install</goals>
<arguments>-Dmaven.javadoc.skip=true</arguments>
<tagBase>https://github.com/OmicsDI/ddi-omicsDI/-/tags</tagBase>
</configuration>
</plugin>
</plugins>
</build>
<profiles>
<profile>
<id>skipTestsForReleasePerform</id>
<properties>
<maven.test.skip>true</maven.test.skip>
</properties>
</profile>
</profiles>
<scm>
<connection>scm:git:ssh://[email protected]/OmicsDI/ddi-omicsDI.git</connection>
<developerConnection>scm:git:ssh://[email protected]/OmicsDI/ddi-omicsDI.git</developerConnection>
<tag>HEAD</tag>
</scm>
</project>