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Currently, the evaluate_paf script in pygenomeworks (and the backing readers) require input to be raw text. However, we often use gzip-compressed PAF to save space, and miniasm natively supports reading it. It would be nice to modify our PAF reader to natively support gzipped PAF.
The text was updated successfully, but these errors were encountered:
Currently, the evaluate_paf script in pygenomeworks (and the backing readers) require input to be raw text. However, we often use gzip-compressed PAF to save space, and miniasm natively supports reading it. It would be nice to modify our PAF reader to natively support gzipped PAF.
The text was updated successfully, but these errors were encountered: