@@ -22,7 +22,8 @@ rmd_files:
2222 # - "chapters/annual_chl_pp.Rmd" *Turned off in catalog
2323 - " chapters/habs.Rmd"
2424 - " chapters/SAV.Rmd"
25- # - "chapters/calanus_variation.Rmd" *Missing tech doc page
25+ - " chapters/zooplankton_index.Rmd"
26+ - " chapters/calanus_variation.Rmd"
2627 - " chapters/wbts_mesozooplankton.Rmd"
2728 - " chapters/zoo_abundance_anom.Rmd"
2829 # - "chapters/zoo_diversity.Rmd" *Missing tech doc page
@@ -36,12 +37,14 @@ rmd_files:
3637 # - "chapters/ne_inshore_survey.Rmd" *Shares tech doc page with mab_inshore_survey
3738 # - "chapters/osw_survey_impact.Rmd" *Missing tech doc page
3839 - " chapters/condition.Rmd"
40+ - " chapters/finfish_traits.Rmd"
3941 - " chapters/habitat_diversity.Rmd"
4042 - " chapters/species_dist.Rmd"
4143 - " chapters/energy_density.Rmd"
4244 - " chapters/spawn_timing.Rmd"
4345 - " chapters/exp_n.Rmd"
4446 - " chapters/forage_index.Rmd"
47+ - " chapters/benthos_index.Rmd"
4548 - " chapters/harborporpoise.Rmd"
4649 - " chapters/hms_cpue.Rmd"
4750 - " chapters/hms_landings.Rmd"
@@ -53,16 +56,19 @@ rmd_files:
5356 - " chapters/gom_salmon.Rmd"
5457 - " chapters/grayseal.Rmd"
5558 - " chapters/seabird_ne.Rmd"
59+ - " chapters/cetacean_acoustic.Rmd"
60+ - " chapters/wea_sound"
5661 - " chapters/species_groupings.rmd"
5762#
5863#
5964# #################### OCEANOGRAPHIC ##################
6065 - " chapters/sectionHeaders/oceanographic.rmd"
6166 - " chapters/bottom_temp_insitu.Rmd"
62- # - "chapters/bottom_temp_comp .Rmd" *Missing tech doc page
67+ # - "chapters/bottom_temp_model_anom .Rmd" *Missing tech doc page
6368 - " chapters/bottom_temp_model_gridded.Rmd"
6469 - " chapters/seasonal_oisst_anom_gridded.Rmd"
6570 # - "chapters/seasonal_oisst_anom.Rmd" *Missing tech doc page
71+ # - "chapters/surface_temp_mom6.Rmd"
6672 - " chapters/trans_dates.Rmd"
6773 - " chapters/long_term_sst.Rmd"
6874 - " chapters/cold_pool.Rmd"
@@ -80,7 +86,8 @@ rmd_files:
8086 # - "chapters/heatwave_year.Rmd" *Shares tech doc page with heatwave
8187 # - "chapters/timing_shifts.Rmd" *Missing tech doc page
8288 # - "chapters/observation_synthesis.Rmd" *Missing tech doc page
83- - " chapters/ocean_acidification.Rmd"
89+ - " chapters/ocean_acidification.Rmd"
90+ - " chapters/gom_acidification.Rmd"
8491#
8592#
8693# ######################## ECONOMIC ##################
@@ -94,6 +101,7 @@ rmd_files:
94101 - " chapters/bennet.Rmd"
95102 - " chapters/stock_status.Rmd"
96103 - " chapters/engagement.Rmd"
104+ # - "chapters/community_climate_vulnerability.Rmd" *Missing tech doc page
97105 - " chapters/aquaculture.Rmd"
98106 - " chapters/Wind_dev_speed.Rmd"
99107 - " chapters/wind_port.Rmd"
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