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Unable to run due to ModuleNotFoundError: No module named' importlib. metadata ' #26

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Rhein-momo opened this issue May 7, 2023 · 1 comment

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@Rhein-momo
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Traceback (most recent call last):
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/bin/BacterialTyper", line 12, in
import BacterialTyper.modules
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/init.py", line 22, in
from BacterialTyper import *
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/modules/init.py", line 25, in
from BacterialTyper.modules import *
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/modules/annot.py", line 20, in
from BacterialTyper.config import set_config
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/config/init.py", line 7, in
from BacterialTyper.config import *
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/config/extern_progs.py", line 29, in
from BacterialTyper.scripts import functions
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/scripts/init.py", line 27, in
from BacterialTyper.scripts import *
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/scripts/database_generator.py", line 33, in
from BacterialTyper.scripts import min_hash_caller
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/BacterialTyper/scripts/min_hash_caller.py", line 33, in
import sourmash
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/sourmash/init.py", line 113, in
from . import lca
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/sourmash/lca/init.py", line 8, in
from .command_index import index
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/sourmash/lca/command_index.py", line 9, in
from sourmash import sourmash_args
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/sourmash/sourmash_args.py", line 46, in
import screed
File "/home/momo/mambaforge/envs/BacterialTyper_mamba/lib/python3.7/site-packages/screed/init.py", line 39, in
from importlib.metadata import version, PackageNotFoundError
ModuleNotFoundError: No module named 'importlib.metadata'

@Rhein-momo
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I reinstalled importlib-metadata=4.5.0, but the issue hasn't been resolved

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