Install

#! /bin/sh -

currdir=`pwd`

cd ./FATCATMain

if(test -d "/usr/include/c++/") then
	cp basic_90.h basic.h
else	cp basic_73.h basic.h
fi

make

echo
echo "make is completed"
echo 
echo "====================================================================="
echo "NOTE 1: please setup the FATCAT environment for correct FATCAT usage"
echo "export FATCAT=$currdir  # add to .bashrc"
echo "setenv FATCAT $currdir  # add to .cshrc"
echo "NOTE 2: please include the path of $currdir/FATCATMain into the .login file"
echo "so that you can run FATCAT under any directory"
echo "====================================================================="
echo
echo "====================================================================="
echo "Please do a simple FATCAT test"
echo "go to the ./Examples_FATCAT"
echo "excute \"FATCAT -p1 1a21A.pdb -p2 1hwgC.pdb -o 1a21A_1hwgC -m -ac -t\""
echo "once the job is completed, excute \"diff 1a21A_1hwgC.aln compare.aln\""
echo "if no difference is found in comparing the two files, then FATCAT is ok"
echo "====================================================================="
echo
echo "Please read the Readme file for more details of FATCAT usage"
echo
echo "Installation is completed"