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confusing comment line in variantCalling-workflow.wdl #24

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jayoung opened this issue Dec 7, 2022 · 0 comments
Open

confusing comment line in variantCalling-workflow.wdl #24

jayoung opened this issue Dec 7, 2022 · 0 comments

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@jayoung
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jayoung commented Dec 7, 2022

hey,

again, I'm using the examples as a starting point for understand wdl syntax.

tiny picky thing: in the variantCalling-workflow.wdl script, the comment on line 68 (" # Get the basename, i.e. strip the filepath and the extension") - I don't think the script is doing that on line 69? Looks like it's just concatenating a couple of the specified inputs.

I'm sure I will want to learn how to do the filepath stripping thing sometime - I'll look elsewhere to find it.

Janet

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