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Sampling restart: failed to integrate to next output time (0.01) in less than max_num_steps steps #15

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hyunjimoon opened this issue Nov 11, 2022 · 0 comments

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09:58:02 - cmdstanpy - INFO - CmdStan start processing
chain 1 |          | 00:00 Status
chain 1 |▊         | 00:46 Status
chain 2 |▊         | 01:16 Status
chain 1 |█▋        | 02:39 Iteration:    1 / 1050 [  0%]  (Warmup)
chain 2 |██▌       | 02:58 Iteration:  100 / 1050 [  9%]  (Warmup)
chain 1 |██▌       | 03:35 Iteration:  100 / 1050 [  9%]  (Warmup)
chain 1 |███▎      | 04:17 Iteration:  200 / 1050 [ 19%]  (Warmup)
chain 2 |█████     | 04:24 Iteration:  400 / 1050 [ 38%]  (Warmup)
chain 1 |████▏     | 04:54 Iteration:  300 / 1050 [ 28%]  (Warmup)
chain 1 |█████     | 05:27 Iteration:  400 / 1050 [ 38%]  (Warmup)
chain 2 |███████▌  | 05:33 Iteration:  700 / 1050 [ 66%]  (Warmup)
chain 1 |█████▊    | 05:58 Iteration:  500 / 1050 [ 47%]  (Warmup)
chain 2 |█████████▏| 06:20 Iteration:  900 / 1050 [ 85%]  (Warmup)
chain 1 |██████▋   | 06:27 Iteration:  600 / 1050 [ 57%]  (Warmup)
chain 1 |██████████| 07:56 Sampling completed                       
                                                                                                                                                                
chain 2 |██████████| 07:56 Sampling completed                       
10:05:59 - cmdstanpy - INFO - CmdStan done processing.
10:05:59 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 41, column 8 to column 184)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 41, column 8 to column 184)
Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 41, column 8 to column 184)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 41, column 8 to column 184)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 53, column 8 to column 59)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/15879-Fall2022/Homeworks/HW7/stanify/stan_files/pp_hierORsbc/pp_hierORsbc_data2draws.stan', line 41, column 8 to column 184)
Consider re-running with show_console=True if the above output is unclear!
est_param pred_birth_frac
10:06:01 - cmdstanpy - INFO - CmdStan start processing
chain 1 |          | 00:00 Status
chain 2 |          | 00:00 Status
@hyunjimoon hyunjimoon changed the title Ode_rk45 sampling restart Sampling restart: failed to integrate to next output time (0.01) in less than max_num_steps steps Nov 11, 2022
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