🪵 BayesSD meeting Log #23
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Not sure what I'm looking at here. |
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@tomfid mentioned kicking off cookbook so I drafted the title and its theme "Constructing Bayes x SD joint space". Construction of product measure is in fact based on rectangles. Definition of Product Distribution Function. If Finished |
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Oct W1,2 @tomfid
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@tomfid the above is from one of Nathaniel's lecture which could be helpful initial point of the lingo mapping table. I started in wiki but I became very certain in one day that wiki may not be a good place (doesn't have access in mobile app). |
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10/21 agenda @tomfid
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Oct W4
Detail:
Target-wise: affordable analytics
Donella's wisdom:
Geoffrey's wisdom from platform revolution -> design data-sharing api (collaborative sharing e.g. maintenance)
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I wish to use this Fri 3pm meeting as one milestone to couple our efforts; this blueprint is one initial point :) The goal is to seek optimization + visualization support for dynamic modelers (especially pure Vensim users) who I think are the greatest market segment (@tomfid is there any statistics on user segmentation of each tool? for instance, from the following three cases, what would be the ratio of each three? + how much % of people are we leaving out?) To be very careful but honest, removing the use of optimization algorithm without diagnosis is one option. I've heard good comments on Stan's design decision of not offering Metropolis Hastings option. @jandraor could you please prepare the summary of rvar doc by Matthew (and SD-connection) as we discussed last week? I am meeting with two Stan devs before - will share “arviz’s wrapper or multi-index for posterior group can streamline 2,3” process on Fri.
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For NovW4 |
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12W1 agenda (Tom, Jair, Angie)
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12W3 (Tom, Jair, Angie)
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Dec20 Angie, Hazhir
more experiments in here b. fire-fighting covid model: hyunjimoon/VaccineMisinf#4 (comment)
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Hazhir Angie 1W1 1. objective function log posterior (accuracy)
Q1. how to make use of components of logposterior? e.g. how can modelers improve their model, if they found: ii) containment: iii) compromise: tension btw information encoded in 'prior_func' and 'likliehood_func'
2. optimization algorithm (speed)3. effect of process noise during forward, backwardQ. what hypothesis interests you? can it be a paper?
4. Could non-linearity of generator possibly affect rank uniformity in SBC?5. literature review on simulation-based inferenceQ. plots? ii) plot design by prior location and scale, noise fraction as attached from their paper Detecting Model Misspecification in Amortized Bayesian Inference with Neural Networks
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Tom, Jair, Angie 1W1
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Tom Angie 0210
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@jandraor and Angie 0217
20 policies (mask, anti-virus, search strategies, vaccine (supply chain)) each of them are not mutually exclusive and have dependence |
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tom, angie classification of people (atomized bit)
bit is flow, atom is stock, Q. role of energy to fasten bit2atom? 1. label
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past\future | observer 👀 | actor 🤜 |
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effect of feature | describe [[def(BE_⬇️)]], [[def(PC_⬇️)]] | explain [[def(BE_⬆️)]] |
prediction | predict [[def(PC_⬆️)]] | synthesize [[def(PC_🔃)]] |
- ⬆️, ⬇️, 🔃 is ability to act, think, think-then-act
- 🔃 requires time stone, which increases act-think clockspeed through simulation (detail in [[W11_Stones and Gauntlet]])
- [[def(PC_⬇️)]] desires [[def(PC_🔃)]] and with easy-to-use tool, persuasion success rate would be over 50%
2. label $atom_t(bit_t)$
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[[def(BE_⬇️)]] is observer or actor using non-computerized human language (non-scalable approximation) to explain certain effect of feature
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[[def(BE_⬆️)]] is actor choice of adapting before theorizing (industry mentors)
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[[def(PC_⬇️)]] is observer choice of using measurement, econometrics, causal inference to explain effect of feature
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[[def(PC_🔃)]] s
3. persuade $atom_t(bit_t) \rightarrow atom_{t+1}(bit_{t})$
- order fastest to slowest clockspeed action and plan out change
4. persuade $atom_{t+1}(bit_t) \rightarrow atom_{t+1}(bit_{t+1})$
5. label $bit_{t+1}$
social science testing with genome
- https://github.com/orgs/Data4DM/projects/3/views/2?pane=issue&itemId=57482640
- marginnote3app://note/5F80E6CE-B741-430D-8B66-149DA0D1C8E7
- bayesdb (IS THERE STH truly causal? my hypothesis example) in knowledge production system
transfer learning and hierarchical bayes in transportation
- predicting startup growth with hierarchical gaussian process #200
- spatial and temporal hierarchy #120
- connection with ford and boland paper on fast-slow dynamics modeling
Bloand17_cont_servnet_design.pdf
Ford18_fast_slow_sim.pdf
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gal, angie pre-meetinggiven our goal dynamic canvas.pdf post-meeting |
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miaomiao, angie prior
just in general, supply side (feasibility) - A - M - S - demand side (desirability) likelihoodIn the first part of the conversation, Speaker 1 and Speaker 2 discussed entropy reduction mechanisms in GPT prompts, with Speaker 2 emphasizing the importance of experimentation to find a product-market fit. In the second part, Speakers 1 and 2 discussed their concerns about a research project they are working on with Scott, weighing potential risks against rewards. Speaker 1 proposed an alternative idea and sought feedback on their other ideas, including the role of VCs and the difference between entrepreneurs and founders. Transcript https://otter.ai/u/s4_sbCL4NR1s-rfnM5JVf1RtZXU?view=transcript Action Items posteriorschedule for 30min meeting:
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@tomfid, nathaniel, angie 1 When you were (are) applying Bayesian methods and system dynamics modeling in health policy, what were the key challenges and insights? 3 Can your experiences in health policy modeling be transferred to modeling entrepreneurial learning? What similarities and differences do you see between these domains? 4 Given the issues in entrepreneurial learning literature (lack of formality in units and types), do you see path where we can join forces to build theory/tool for Bayes + SD? What could be a potential production and diffusion plan for this theory? 5 How can the SD+Bayes fields come together to make progress? Are there key technologies that would help? Could probabilistic program(ming) make this easier? (for example)
angie's situation
knowledge production plan and our potential collaboration
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jb, angie (otter) tldr; angie digested 1,2 information as knowledge, and am producing 1. mapping existing entrep.learning approaches with machine.learning learning tribesBayesian (scientific), behavior (effectuation, causal (not exactly same causal in stats.), Evolutionary (@jeanbaptiste do you agree this is most relevant to below table was presented in https://cdmcd.co/JQJLvk session
2. feedback from aom confernece
New Perspectives on Experimental Strategy
Value Creation, Value Capture, and Strategic Theories of Digitally Transformed Firms
Entrepreneurial Experimentation: Processes, Logic, and Future Research
3. extending Causal Logic with benchmarking simulation tool to navigate uncertainty:
4. Pivot Game to educate entrepreneurs to build personalized causal / probabilistic reasoning to
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summary of the conversation with @chasfine so far on this thread topic
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Tom, Angie
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Matt: M, Angie: A
Each of those problems is simultaneously happening. But human can only think about one (or few) of them i.e. can't play 3D chess.
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tom, angie
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tom, angie
e.g. product3
@tomfid moving forward, will share agenda via github and add review as a reply here. |
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@tomfid , angie angie will introduce one paper each from three schools of thought (cognitive science, strategy, operations) she desires to synthesize: Vul, E., Goodman, N., Griffiths, T. L., & Tenenbaum, J. B. (2014). One and done? Optimal decisions from very few samples. Cognitive science, 38(4), 599-637. Direction Gans, J. S. (2023). Experimental choice and disruptive technologies. Management Science, 69(11), 7044-7058. Phadnis, S, and C. Fine (2017), “End-to-end Supply Chain Strategies: Parametric Study of the Apparel Industry,” Production and Operations Management, 26(12), 2305-2322. |
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Bob horn, @jeanbaptiste with discussion prompt #256 (comment) 🗣️ analyzing bob's info mural, angie organized 📦product1 as four modules:
using Comparing Founder Strategies for Physical vs Digital Startups cld |
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tom, angie 1. 🔴automatingcan we parse SD .xml file to our parameter classification table? 2. ⚱️polya's urn rich get richer dynamic
3. bit atom management4. sigma ratio of layer2:layer1flexibility encoded as prior on sigma ratio (e.g. process noise: measurement noise ratio?)
context in Process noise and Feature noise.md, ProcessNoise.pdf |
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Tom, Angie Q2. To understand one key comment from Theory of adjacent possible, "we note that Steel et al.’s stochastic implementation from Steel20_BDproc_comb_innov.pdf is not a discretisation of the TAP equation itself, because it requires a calculational timestep to be small to keep the creation probabilities below unity; it is a stochastic discretization of a continuum approximation to the original equation. Their numerical analysis also makes the further assumption of a fixed upper limit (usually i max= 4) in the summation." I made a table comparing Steel20's stochastic birth and death process and deterministic adjacent possible model (both authored by Kauffman). Q3. I think "calculational timestep to be small to keep the creation probabilities below unity" is relevant to
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📦research product
THEORETICAL VERSION: To achieve this integration, I first tackle the founder-investor alignment problem, moving from BP|DE to BPD|E by incorporating desire while keeping environment modular. Using investor archetype analysis, I demonstrate how heterogeneous investors vary in both meaning construction (how they interpret signals) and judging preferences (what they value). This foundational step reveals how rational meaning construction emerges between founders and investors through Bayesian calibration. [[🌓📐Bayesian Calibration in Entrepreneurial Decision Making]] The final transformation from BPD|E to BPDE introduces environment integration, where individual entrepreneurial decisions harmonize with societal-level uncertainty dynamics. The theory shows how entrepreneurs can align their cognitive processes with market-level epistemic and aleatoric uncertainty ratios, achieving true Bayesian calibrated choice. This sequential approach - first establishing rational meaning construction, then extending to market-level integration - provides a complete theoretical framework for entrepreneurial decision-making. [[🌔Bayesian Calibrated Choice_Balancing Individual and Market-Level Uncertainty]] ALGORITHMIC VERSION: The first transformation from BP|DE to BPD|E implements Bayesian calibration through p(action|state) and p(state|observation) modeling. Using synthetic investor generation and hierarchical logit analysis, I model the joint distribution p(meaning, judging|investor_type). This allows quantification of how meaning construction p(s|o) and judging functions p(a|s) vary across investor archetypes, enabling systematic analysis of rational meaning construction. The final transformation to BPDE implements simulation-based calibration checking for Bayesian computation, verifying when individual cognitive architectures achieve consistency with market-level uncertainty. The implementation uses program synthesis to model the complete integration, with Bayesian self-consistency equations πprior(θ) = ∫dy∫dθ̃ πpost(θ|y)πobs(y|θ̃)πprior(θ̃) verifying alignment between individual and market-level distributions. ⚙️(📦) process of convergence to research productJan.07received feedback on smart sampling startup.pdf from those who assumed the role of scientist, engineer/modeler, practitioner. This is Table: Integration of Feedback into Action Items
Jan.08
Especially I was very surprised that Jeff Dotson and Prof. Ben-Akiva's phd student (who have relatively expertise on Bayesian computation, Prof. Ben-Akiva covers Bayesian heavily in his demand analysis class as attached) weren't aware that bayesian calibration differs from bayesian inference ("Bayesian inference provides a procedure for constructing inferences but it offers no general guarantees on the overall behavior of those inferences. If we want to ensure robust inferences then we at least need to attempt some calibration in order to determine how we expect our model to perform").
Jan.09connected mobility, inspection paradox #209, #186
2 Figure 1: CHIP Mobility Framework, reproduced from Figure11.6 in Sumantran et al. (2017) combining capital sources through flexible financing, institutions can accelerate mobility innovation. Rather than using rigid metrics or single-mode solutions, strategies like crosssector partnerships and iterative prototyping provide the adaptability modern systems need. For mobility startups, this means accepting partial commitments and solving immediate problems without waiting for full funding; for transportation systems, it means building networks that evolve with user preferences Jan.10gave talk at TBV Conference Agenda and List of Attendees 9-11 Jan 2025_final.pdf with 🛝angie moon rational meaning construction.pdf
Jan.131. high level choice via
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@tomfid
I will log our trials during cooking meeting here!
For Sep.W4:
I wonder what each dimensions of
prior_pred
means (especially 4) 20 is length of timeaxis.🎼 Master B major to control F major: simulation of, by, for Box-Flow #25
If "Using net flows does solve the problem of autocorrelation of the measurements" this is the reason we need to invent a structure in generator, could statistical model structure that estimates parameter assuming first order autocorrelation embedded time series (gaussian process; Mike Betancourt's robust gaussian process estimation) be a viable solution?
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