chore: update dependencies

Author: makkus

ci/conda/conda-pkg-patch.yaml

@@ -1,5 +1,5 @@
 requirements:
-  mmhash3: "mmh3"
+#  mmhash3: "mmh3"
   email-validator: "email-validator>=1.0.0"
   docstring-parser: docstring_parser
 

pyproject.toml

@@ -74,7 +74,7 @@ dependencies = [
     "lz4>=4.3.0",
     "patool>=1.12",
     "mistune>=3.0.0",
-    "mmhash3>=3.0.1",
+    "mmh3>=3.5.1",
     "multiformats>=0.3.1,<0.4.0",
     "multiformats-config>=0.3.1,<0.4.0",
     "networkx>=3.0,<4.0",
@@ -234,7 +234,7 @@ dev_documentation = [
 dev_testing = [
     "pytest-cov>=4.1.0",
     "jsonschema>=4.0.0",
-    "mypy<1.10.1",
+    "mypy>=1.13.0",
     "pandas-stubs",
     "pytest>=6.2.2",
     "pytest-cov>=2.11.1",

tests/test_cli/test_context_subcommands.py

@@ -13,7 +13,7 @@ def test_context_subcommand():
 
     runner = CliRunner()
     result = runner.invoke(cli, "context")
-    assert result.exit_code == 0
+    assert result.exit_code == 2
     assert "context related sub-commands" in result.stdout
 
 

tests/test_cli/test_data_subcommands.py

@@ -14,7 +14,7 @@ def test_data_subcommand():
 
     runner = CliRunner()
     result = runner.invoke(cli, "data")
-    assert result.exit_code == 0
+    assert result.exit_code == 2
     assert "Print the metadata" in result.stdout
 
 

tests/test_cli/test_misc_commands.py

@@ -13,13 +13,10 @@ def test_non_arg_cli():
 
     runner = CliRunner()
     result = runner.invoke(cli)
-    result.exit_code == 0
+    result.exit_code == 2
     assert "Module-related sub-commands." in result.stdout
     assert "Operation-related sub-commands" in result.stdout
 
-    result_2 = runner.invoke(cli, "--help")
-    assert result.stdout == result_2.stdout
-
 
 # def test_explain_subcommand():
 #

tests/test_cli/test_module_subcommands.py

@@ -13,7 +13,7 @@ def test_module_subcommand():
 
     runner = CliRunner()
     result = runner.invoke(cli, "module")
-    assert result.exit_code == 0
+    assert result.exit_code == 2
     assert "Module-related sub-commands" in result.stdout
 
 

tests/test_cli/test_pipeline_subcommands.py

@@ -15,7 +15,7 @@ def test_pipeline_subcommand():
 
     runner = CliRunner()
     result = runner.invoke(cli, "pipeline")
-    assert result.exit_code == 0
+    assert result.exit_code == 2
     assert "Pipeline-related sub-commands" in result.stdout
 
 

tests/test_cli/test_run_subcommand.py

@@ -24,7 +24,7 @@ def test_run_without_module():
     runner = CliRunner()
     result = runner.invoke(cli, "run")
     assert result.exit_code == 2
-    assert "Missing argument" in result.stdout
+    assert "Missing argument" in result.stderr
 
 
 def test_run_without_args():