From 2afd4a16d0b25f71c8245c8e0c1ad126bd7f5efa Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:46:36 +0200 Subject: [PATCH 1/6] [NOTE] dev-2021-04-01 --- 00_dev_meetings/dev-2021-04-01.md | 42 +++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) create mode 100644 00_dev_meetings/dev-2021-04-01.md diff --git a/00_dev_meetings/dev-2021-04-01.md b/00_dev_meetings/dev-2021-04-01.md new file mode 100644 index 0000000..3120ec6 --- /dev/null +++ b/00_dev_meetings/dev-2021-04-01.md @@ -0,0 +1,42 @@ +# # BioPAL Agenda - 01.04.2021 - PolINSAR Prep + +**Present**: Francesco B., Stefanie L., Klaus S., Emanuele G., Alberto A., Mauro M., Michele C., Bjoern R. + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +* website +* tutorial + * first draft ready next week +* technical + * new input output APP for configuration files +* FTP Server migration + * Not suitable for going public for Aresys + * migration to MAAP + * Data Licensing + * Data can change, ideally a flexible space that allows for data updates + + +# Discussion +* When to go public: + * Going Public 19th of April + * Discussion of remaining issues on the 22nd of April +* doc-string and testing + * sprint Friday 23rd + + +### Proposed action Items: +* [ ] Issue: which functions to test (Francesco issue set-up, all devs add functions) +* [ ] First Tutorial (Francesco, Emanuele) +* [ ] Docker update (Paolo) +* [ ] Testing Sprint initialization (Stefanie) +* [ ] Adding content to Website (Klaus & all) + +# Next Meeting: 15.04.2021 + + +**[Link to all meeting notes](https://github.com/BioPAL/community)** \ No newline at end of file From c67fa0b1eea1660c6f52f0c22b60ccb34ecd5b85 Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:47:20 +0200 Subject: [PATCH 2/6] [NOTE] dev-2021-06-03 --- 00_dev_meetings/dev-2021-06-03.md | 34 +++++++++++++++++++++++++++++++ 1 file changed, 34 insertions(+) create mode 100644 00_dev_meetings/dev-2021-06-03.md diff --git a/00_dev_meetings/dev-2021-06-03.md b/00_dev_meetings/dev-2021-06-03.md new file mode 100644 index 0000000..916e16d --- /dev/null +++ b/00_dev_meetings/dev-2021-06-03.md @@ -0,0 +1,34 @@ +# # BioPAL Agenda - 03.06.2021 + +**Present**: Francesco, Stefanie, Clement, Emanuele + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +* Welcome Romain +* 4 new users requesting access to data +* creation of issues for minor and major fixes +* testing and continuous integration +* tutorials for other modules + * more feedback for FD tutorial + +# Discussion +* BioPAL Activity + * refactoring + * PolINSAR Preparation (website, tutorial) + * Starting to integrate tests + * new users +* BTK/ BPS/ BioPAL discussion needed + + +### Proposed action Items: +- [ ] discussion on meeting shedule + +# Next Meeting: 17.06.2021 + + +**[Link to all meeting notes](https://github.com/BioPAL/community)** \ No newline at end of file From d0eeb90b0913e7ecf4b8f3ce9065d18f09f5fb05 Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:48:00 +0200 Subject: [PATCH 3/6] [NOTE] dev-2021-06-17 --- 00_dev_meetings/dev-2021-06-17.md | 47 +++++++++++++++++++++++++++++++ 1 file changed, 47 insertions(+) create mode 100644 00_dev_meetings/dev-2021-06-17.md diff --git a/00_dev_meetings/dev-2021-06-17.md b/00_dev_meetings/dev-2021-06-17.md new file mode 100644 index 0000000..3ef7d93 --- /dev/null +++ b/00_dev_meetings/dev-2021-06-17.md @@ -0,0 +1,47 @@ +# # BioPAL Agenda - 17th june 2021 + +**Present**: Francesco, Emanuele, Stefanie, Michele, Alberto, Mauro, Paolo + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +- Documentation and Sphinx (Mauro) + - How to cross link chapters? + - Rules on Flow diagrams +- Definition on Forest Disturbance + - Definition/ Design of Algorithm and Testing + - Definition of Dataset + - PR on Tutorial only introduction part needs to be updated +- + +# Discussion +- Documentation and Sphinx (Mauro) + - How to cross link chapters? + - Rules on Flow diagrams +- the way forward + - Packaging and Distribution + - pip release and developer installation by end of July + - Documentation and streamlining source code + - ongoing + - Data io API: + - more dicussion needed, see dedicated GitHub issue + - Continuous integration and testing: + - Decision to only merge PR's with core functionality documented and tested + + + +### Proposed action Items: +* [ ] meeting for packaging and installation (Francesco, Emanuele, Stefanie) +* [ ] FH Tutorial date (Romain) +* [ ] Change Analysis Tutorial (Alberto): 01.08.2020 +* [ ] GitHub issue collecting ideas for read_data wrapper (Aresys) +* [ ] meeting discussing data wrapper functionality + +# Next Meeting: 01.07.2021 + + +**[Link to all meeting notes](https://github.com/BioPAL/community)** \ No newline at end of file From 8445a4d24d04fc8f80fda81411ff1d03f61c1b0e Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:48:24 +0200 Subject: [PATCH 4/6] [NOTE] dev-2021-07-0 --- 00_dev_meetings/dev-2021-07-01.md | 39 +++++++++++++++++++++++++++++++ 1 file changed, 39 insertions(+) create mode 100644 00_dev_meetings/dev-2021-07-01.md diff --git a/00_dev_meetings/dev-2021-07-01.md b/00_dev_meetings/dev-2021-07-01.md new file mode 100644 index 0000000..b64ba87 --- /dev/null +++ b/00_dev_meetings/dev-2021-07-01.md @@ -0,0 +1,39 @@ +# # BioPAL Agenda - 01.07.2021 + +**Present**: Klaus, Mauro, Alberto, Paolo, Francesco, Roman, Michele, Emanuele + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +* Welcome Romain + * Forest Height estimation implementing tomographic profiles +* recap CCN & BioPAL + * One objective is to design an interface to ingest tomographic profile information, to help model inversion in inteferometric phase + * comparison and revision for the tomographic phase of the mission + * Documentation in Markdown attached to online documentation & BioPAL repository + * documentation, testing and modularity +* pip install + * min required Python version now 3.7 + * `pip install` now possible +* focus on lower level apps development + +# Discussion +* FNF classification with simpler interface due to algorithm redefinition (further discussion in CNN july 15th) +* FD tutorial by 01.08.2021 +* Documentation (Mauro): + * compiling documentation with Sphinx + +### Proposed action Items: +- [ ] dedicated chat on data io refactoring +- [ ] set up and test BioPAL on data (Romain) +- [ ] review of pip installation PR (Stefanie) +- [ ] September + +# Next Meeting: 15.07.2021 + + +**[Link to all meeting notes](https://github.com/BioPAL/community)** \ No newline at end of file From 07fc7f5661f72f3a933cf0b2e69137ce485a95f4 Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:48:58 +0200 Subject: [PATCH 5/6] [NOTE] dev-2021-09-23 --- 00_dev_meetings/dev-2021-09-23.md | 42 +++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) create mode 100644 00_dev_meetings/dev-2021-09-23.md diff --git a/00_dev_meetings/dev-2021-09-23.md b/00_dev_meetings/dev-2021-09-23.md new file mode 100644 index 0000000..df76448 --- /dev/null +++ b/00_dev_meetings/dev-2021-09-23.md @@ -0,0 +1,42 @@ +# # BioPAL Agenda - 23.09.2021 + +**Present**: Klaus, Michele, Emanuele, Francesco, Mauro, Roman, Stefanie + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +* FOSS4G presentation next week +* pip installation possible soon +* new wrapper for handling the input data + + +# Discussion +* Release: + * BTK & BPS releases still in design phase currently not influencing BioPAL release shedules, not before November + * Releases every year pre-launch, every 6 months once Biomass data becomes available and bug driven fixes + * formal release v0.1 for CDR beginning of February timed with BioPAL release +* Notch update: + * Documentation and ICB document + * Algorithm development on geocoding related to volumetric products (Space Varying Notch), will soon be implemented. First results suggest new functionality includes bias and may not be an improvement +* Much work on Documentation has been done during summer, will be updated +* encouraging contributions: + * opening issues 2-3 points per team with tagged person to help + * pointer on website to issues + * long term contributions on website + * stackoverflow integration + + +### Proposed action Items: +* [x] wrapper for data handling finished next meeting +* [x] Pip rc release +* [ ] each team make issues with points for contributions by outsiders +* [ ] integration of larger topics on website + +# Next Meeting: 21 October 2021 + + +**[Link to all meeting notes](https://github.com/BioPAL/community)** \ No newline at end of file From 09e4701c0e28328a1119e7d6ed960b1caac0225c Mon Sep 17 00:00:00 2001 From: Stefanie Lumnitz Date: Thu, 21 Oct 2021 11:49:29 +0200 Subject: [PATCH 6/6] [NOTE] dev-2021-10-21 --- 00_dev_meetings/dev-2021-10-21.md | 41 +++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) create mode 100644 00_dev_meetings/dev-2021-10-21.md diff --git a/00_dev_meetings/dev-2021-10-21.md b/00_dev_meetings/dev-2021-10-21.md new file mode 100644 index 0000000..c735f13 --- /dev/null +++ b/00_dev_meetings/dev-2021-10-21.md @@ -0,0 +1,41 @@ +# # BioPAL Agenda - 21.10.2021 + +**Present**: Klaus, Emanuele, Michele, Stefanie, Francesco, Clement, Paolo, + +## Agenda +1. Updates +2. Discussion +4. Other + + +# Updates +- [x] pip release + - current 0.2.0rc + - roadmap template to get to 1.0.0 + - includes biopal-quickstart +- [x] wrapper functionality + - includes build in plotting functions + - simplifyied reading of Input data +- [x] issues on github +- Documentation update with numpydoc style + + +# Discussion +- BioPAL & MAAP interface + - conversation with Capgemini on build from Docker +- Data interface to 'MAAP provided data' + - migration towards new format for next BPS round + - currenlty migration to intermediate format +- CI & CD + +### Proposed action Items: +- [ ] Documentation upload on readthedocs +- [ ] Documentation integration on website +- [ ] Documentation on minimum requirements +- [ ] larger contribution ideas on website +- [ ] CI & CD check by end of January 2022 with github actions or similar +- [ ] BioPAL integration on MAAP + + +# Next Meeting: 18.11.2021 +