{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":92341187,"defaultBranch":"master","name":"BioSequences.jl","ownerLogin":"BioJulia","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-05-24T22:15:46.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/6486271?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1697699615.0","currentOid":""},"activityList":{"items":[{"before":"33d4cf221c2104534267adac150a8819815beacf","after":"de0e1ce5875b994820684819df5b8c73ebe864da","ref":"refs/heads/gh-pages","pushedAt":"2024-05-28T10:51:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on e9633fc","shortMessageHtmlLink":"build based on e9633fc"}},{"before":"117ec6fc950ccf4162e5a8af5d6aa746fefc7493","after":"33d4cf221c2104534267adac150a8819815beacf","ref":"refs/heads/gh-pages","pushedAt":"2024-05-28T10:50:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 18d70d5","shortMessageHtmlLink":"build based on 18d70d5"}},{"before":"18d70d5b75da94913ea59dfa9570b6ff69c9effb","after":"e9633fcfde0cd92122a1a76cf755f13f10ab76b7","ref":"refs/heads/master","pushedAt":"2024-05-28T10:49:14.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Precompute ExactSearchQuery faster (#305)\n\nCompute bshift and fshift in one pass instead of two.","shortMessageHtmlLink":"Precompute ExactSearchQuery faster (#305)"}},{"before":"95d9218dabd50be36700760713796e9711a425a5","after":"18d70d5b75da94913ea59dfa9570b6ff69c9effb","ref":"refs/heads/master","pushedAt":"2024-05-28T10:48:52.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Drop CI for MacOS Julia 1.5 (#306)\n\nThe latest MacOS is not compatible with x86 processors, and Julia 1.5 is only\r\ncompatible with x86. We could test on older versions of MacOS, but why bother.","shortMessageHtmlLink":"Drop CI for MacOS Julia 1.5 (#306)"}},{"before":"3831758866882e793c673406315a5158a88373ae","after":"117ec6fc950ccf4162e5a8af5d6aa746fefc7493","ref":"refs/heads/gh-pages","pushedAt":"2024-03-22T14:51:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 95d9218","shortMessageHtmlLink":"build based on 95d9218"}},{"before":"56d9ab576d731f882d86e1d167308624b2e0df9b","after":"95d9218dabd50be36700760713796e9711a425a5","ref":"refs/heads/master","pushedAt":"2024-03-22T14:49:59.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Update `ispalindromic` (#304)\n\nUpdate `ispalindromic`\r\n\r\nExpand the documentation to explain that it is palindromic with respect to the\r\nreverse-complement. Also implement a fast-path for 2-bit nucleotides.","shortMessageHtmlLink":"Update ispalindromic (#304)"}},{"before":"60e6b5a7c5a5fb4706db2e912b107b344d8a73b5","after":"3831758866882e793c673406315a5158a88373ae","ref":"refs/heads/gh-pages","pushedAt":"2024-01-15T11:20:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 56d9ab5","shortMessageHtmlLink":"build based on 56d9ab5"}},{"before":"1314bbf493fc4ee69b8d350c9497da1ec409c356","after":"56d9ab576d731f882d86e1d167308624b2e0df9b","ref":"refs/heads/master","pushedAt":"2024-01-15T11:19:17.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Update docs with recipes pages\n\nAdd a \"recipes\" page for the documentation, which provide tested examples of\nhow to use BioSequences.\n\nRemove links to Gitter, and to OpenCollective.","shortMessageHtmlLink":"Update docs with recipes pages"}},{"before":"d0abb06166cc928ae5b611c6cc4be9e62d0accf9","after":"60e6b5a7c5a5fb4706db2e912b107b344d8a73b5","ref":"refs/heads/gh-pages","pushedAt":"2024-01-02T20:08:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 1314bbf","shortMessageHtmlLink":"build based on 1314bbf"}},{"before":"3de9d436879ffda8bbcc57953413a9dff5393cb1","after":"1314bbf493fc4ee69b8d350c9497da1ec409c356","ref":"refs/heads/master","pushedAt":"2024-01-02T20:06:27.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Document string literal macro","shortMessageHtmlLink":"Document string literal macro"}},{"before":"1eb1de3c464accce60f73746c8838e13791b7c19","after":"d0abb06166cc928ae5b611c6cc4be9e62d0accf9","ref":"refs/heads/gh-pages","pushedAt":"2023-10-23T08:41:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 3de9d43","shortMessageHtmlLink":"build based on 3de9d43"}},{"before":"9906cad2e89be9df322b4ebdb8a6fb90677a5aa8","after":"3de9d436879ffda8bbcc57953413a9dff5393cb1","ref":"refs/heads/master","pushedAt":"2023-10-23T08:38:48.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Update issue and PR template to match BioJulia guidelines\n\nIn BioJulia discussion 11, and BioJulia/Contributing, we've decided to make the\ntemplate less verbose, and more approachable.","shortMessageHtmlLink":"Update issue and PR template to match BioJulia guidelines"}},{"before":"21f77ba4aafb0f1bc74ff826b9de8f5dade834ae","after":"1eb1de3c464accce60f73746c8838e13791b7c19","ref":"refs/heads/gh-pages","pushedAt":"2023-10-19T07:15:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 4038670","shortMessageHtmlLink":"build based on 4038670"}},{"before":"8a546785526b291967bbd2c56ed68d8e66461df0","after":"21f77ba4aafb0f1bc74ff826b9de8f5dade834ae","ref":"refs/heads/gh-pages","pushedAt":"2023-10-16T13:24:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 9906cad","shortMessageHtmlLink":"build based on 9906cad"}},{"before":"76867730f4d4b4725f3a644615926443ba2ef57a","after":"9906cad2e89be9df322b4ebdb8a6fb90677a5aa8","ref":"refs/heads/master","pushedAt":"2023-10-16T13:21:21.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Do not fail CI if codecov falls","shortMessageHtmlLink":"Do not fail CI if codecov falls"}},{"before":"40ee6ccb738415d17ecc832ccda55b6fdbf57bff","after":"8a546785526b291967bbd2c56ed68d8e66461df0","ref":"refs/heads/gh-pages","pushedAt":"2023-10-16T12:28:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 7686773","shortMessageHtmlLink":"build based on 7686773"}},{"before":"40386706fc89a22326b09288a6018b330ae37c81","after":"76867730f4d4b4725f3a644615926443ba2ef57a","ref":"refs/heads/master","pushedAt":"2023-10-16T12:25:21.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Do not run doctests as part of unittests","shortMessageHtmlLink":"Do not run doctests as part of unittests"}},{"before":"a9c676edec33d9751ab408da190fdf5dfac87469","after":"40ee6ccb738415d17ecc832ccda55b6fdbf57bff","ref":"refs/heads/gh-pages","pushedAt":"2023-10-15T12:07:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 4038670","shortMessageHtmlLink":"build based on 4038670"}},{"before":"f64918e27f3f06fe649293c2a6b2d451cf15ec8c","after":"40386706fc89a22326b09288a6018b330ae37c81","ref":"refs/heads/master","pushedAt":"2023-10-15T12:05:11.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Define compat for Random\n\nThis was not needed previously as the version of Random was tied to the version\nof Julia, but in upcoming Julia versions, Random will be versioned separately.\nThis change makes BioSequences.jl compatible with future versions of Julia.","shortMessageHtmlLink":"Define compat for Random"}},{"before":"8c76b216f713762f17c0318fd0fad206d813bdfa","after":"a9c676edec33d9751ab408da190fdf5dfac87469","ref":"refs/heads/gh-pages","pushedAt":"2023-09-26T14:03:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on f64918e","shortMessageHtmlLink":"build based on f64918e"}},{"before":"b4f597064607952d418b1344f567fd644860b337","after":"f64918e27f3f06fe649293c2a6b2d451cf15ec8c","ref":"refs/heads/master","pushedAt":"2023-09-26T14:01:28.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Allow translation of LongSubSeq\n\nThis also fixes an issue in the translation code, and adds another constructor\nto LongSubSeq that I thought was missing.","shortMessageHtmlLink":"Allow translation of LongSubSeq"}},{"before":"831624757aed50f3a0765b7cb96b4d772e0b3137","after":"8c76b216f713762f17c0318fd0fad206d813bdfa","ref":"refs/heads/gh-pages","pushedAt":"2023-09-26T12:08:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on b4f5970","shortMessageHtmlLink":"build based on b4f5970"}},{"before":"b57a94a729e628ac01b869ce436543fe3f1b1b49","after":"b4f597064607952d418b1344f567fd644860b337","ref":"refs/heads/master","pushedAt":"2023-09-26T12:06:06.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Do not check for valid data in decode\n\nRelax the requirement of `Alphabet`, such that it is no longer necessary to\ncheck for a valid encoding in `decode`.\nThis implies that storing invalid data in a `BioSequence` is disallowed, but it\nspeeds up `getindex(::BioSequence)`, which is critical.","shortMessageHtmlLink":"Do not check for valid data in decode"}},{"before":"2076fe941c82f2bbb3efc89a926102b51fa92e77","after":"831624757aed50f3a0765b7cb96b4d772e0b3137","ref":"refs/heads/gh-pages","pushedAt":"2023-09-26T11:35:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on b57a94a","shortMessageHtmlLink":"build based on b57a94a"}},{"before":"4839f27ffb658c75f8d0b7096f3dec29cdde428b","after":"b57a94a729e628ac01b869ce436543fe3f1b1b49","ref":"refs/heads/master","pushedAt":"2023-09-26T11:27:53.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Remove downstream BioMakie CI\n\nThis has been consistently broken ever since it was introduced. Also, the tests\ntake like 20 minutes before they fail, single-handedly multiplying BioSequences\nCI time by like 4.","shortMessageHtmlLink":"Remove downstream BioMakie CI"}},{"before":"1f50d72fb0aab983e6ba2828b2183e9c86673b36","after":"2076fe941c82f2bbb3efc89a926102b51fa92e77","ref":"refs/heads/gh-pages","pushedAt":"2023-09-26T11:27:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 4839f27","shortMessageHtmlLink":"build based on 4839f27"}},{"before":"17379915a9dc3eb3c525a228ffee504f34de5ef2","after":"4839f27ffb658c75f8d0b7096f3dec29cdde428b","ref":"refs/heads/master","pushedAt":"2023-09-26T11:25:09.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Improve heuristics of translating ambiguous nucs\n\nUse a more principled approach, such that we now guarantee that ambiguous DNA\nand RNA is translated to exactly the set of amino acids the genetic code\ncorresponds to.","shortMessageHtmlLink":"Improve heuristics of translating ambiguous nucs"}},{"before":"d4f55933524ee2aa16734a16c3621135d0ba2a93","after":"1f50d72fb0aab983e6ba2828b2183e9c86673b36","ref":"refs/heads/gh-pages","pushedAt":"2023-09-26T11:20:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on 1737991","shortMessageHtmlLink":"build based on 1737991"}},{"before":"ee92aad18fa969ecfad604a104ecc4b0c4b697f0","after":"17379915a9dc3eb3c525a228ffee504f34de5ef2","ref":"refs/heads/master","pushedAt":"2023-09-26T11:16:12.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jakobnissen","name":"Jakob Nybo Nissen","path":"/jakobnissen","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/23193950?s=80&v=4"},"commit":{"message":"Bump Documenter to 1.0","shortMessageHtmlLink":"Bump Documenter to 1.0"}},{"before":"c48c6671cc5dbf95da556c448286a1629212e1f4","after":"d4f55933524ee2aa16734a16c3621135d0ba2a93","ref":"refs/heads/gh-pages","pushedAt":"2023-08-29T09:41:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TransGirlCodes","name":"TRΛNS-GIRL.C0DΞS","path":"/TransGirlCodes","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3399309?s=80&v=4"},"commit":{"message":"build based on ee92aad","shortMessageHtmlLink":"build based on ee92aad"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEVbw8zgA","startCursor":null,"endCursor":null}},"title":"Activity · BioJulia/BioSequences.jl"}