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ModelReconstruction.md

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Application specification: ModelReconstruction

This is the application specification for service with identifier ModelReconstruction.

The backend script implementing the application is App-ModelReconstruction.pl.

The raw JSON file for this specification is ModelReconstruction.json.

This service performs the following task: Reconstructs a metabolic model from an annotated genome.

It takes the following parameters:

id label type required default value
genome Genome object WS: genome ✔️
media Gapfilling media WS: media
template_model Template model WS: template_model
fulldb Full DB model bool ✔️ 0
output_path Output Folder folder
output_file File Basename wsid